Gene Ksed_07840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07840 
Symbol 
ID8372293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp791348 
End bp792376 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID644991070 
Productmalate dehydrogenase 
Protein accessionYP_003148605 
Protein GI256824645 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01759] malate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.172278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCAGA TCCACGTCAT CACCCAGGAG GTTCTCGTGA CCCAGCCCGT CAAGGTTGCC 
GTGACCGGCG CCGCCGGTCA GATCGGCTAC TCCCTGCTCT TCCGCATCGC GTCGGGCGAG
CTGCTCGGCC CCGACACCCC CGTCCAGCTC CGCCTGCTGG AGATCACCCC GGCCCTGGAG
GCCCTGGAGG GCGTGGTGAT GGAGCTCGAC GACAGCGCCT TCCCGCTGCT CTCCGGCGTC
GAGATCGGGG ACGACGCCAA CACCATCTTC GACGGCGCGA ACGTCGCCCT GCTGGTGGGC
GCGCGCCCCC GCGGCAAGGG CATGGAGCGC TCGGACCTGC TGGAGGCCAA CGGCCAGATC
TTCACCGGCC AGGGCAAGGC GCTCAACGAC AACGCCGCCG ACGACATCCG CGTCACGGTG
ACCGGCAACC CCGCGAACAC CAACGCGCTG ATCACCATGA ACAACGCCCC GGACATCCCG
GCCGAGCGCT TCTCGGCGCT GACCCGGCTG GACCACAACC GCGCCCTGGC CCAGCTGGCC
AAGAAGGCCG GTGTGTCCAT CAACGACATC CAGCGCATGA CCATCTGGGG CAACCACTCG
GCCACCCAGT ACCCGGACAT CTTCCATGCC ACCATCAACG GCGAGAACGC AGCCGAGGTC
GTGGACGACC AGCAGTGGTT GGAGAACGAC TTCATCCCCA CCGTCTCGCA GCGTGGCGCG
GCCATCATCG AGGCGCGGGG CTCGTCCTCC GCGGCGTCGG CCGCCTCGGC CACGATCGAC
CACACGCGCA CCTGGCTGTC CGGCACCGCC GAGGGCAACT GGACCTCCAT GGCCGTGCGC
TCCGACGGCT CCTACGGCGT CCCCGAGGGG CTCATCTCGT CCTTCCCGGT GACCACGAAG
GACGGCGAGT ACGAGATCGT CCAGGGCCTC GAGATCAACG AGTTCTCCCA GGGCAAGATC
GACGCGACCG TCGCCGAGCT GAGCGAGGAG CGCGACACCG TGCGCGCCAA GGGCCTCATC
GAGGGCTGA
 
Protein sequence
MAQIHVITQE VLVTQPVKVA VTGAAGQIGY SLLFRIASGE LLGPDTPVQL RLLEITPALE 
ALEGVVMELD DSAFPLLSGV EIGDDANTIF DGANVALLVG ARPRGKGMER SDLLEANGQI
FTGQGKALND NAADDIRVTV TGNPANTNAL ITMNNAPDIP AERFSALTRL DHNRALAQLA
KKAGVSINDI QRMTIWGNHS ATQYPDIFHA TINGENAAEV VDDQQWLEND FIPTVSQRGA
AIIEARGSSS AASAASATID HTRTWLSGTA EGNWTSMAVR SDGSYGVPEG LISSFPVTTK
DGEYEIVQGL EINEFSQGKI DATVAELSEE RDTVRAKGLI EG