Gene Ksed_07700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07700 
Symbol 
ID8372279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp776699 
End bp777424 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content75% 
IMG OID644991056 
ProductNTP pyrophosphohydrolase 
Protein accessionYP_003148591 
Protein GI256824631 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.054443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.43952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA GCTACCACCG TCCTGATCCG ACCGGGCCCA TCCCGCTGTT CGTGCGGGTG 
GGGGAGCACG TCCTGGCGCT GGGGCACGGG GTGGACCCGA CCTGGTTGGC CCGCGAGCTG
GGGGCTACGG CCCGCGAGGG CGCCGTCCCG GTGGTGGACC ACGGACCGGT GGACGAGGCG
GGGGACCGGC CGCTGGTGCT CGACTACGGC GACGGGTACG ACCCGGCGGA CCTCCCCCGT
CCCGCGGCGC CGGGGATGGT GGTCGAGTCC GGCGCACCGC CGCGCCGCCA GCGGGTGGCC
ACCCACGCGG TGGTGTTCGA CCCGTCCGGT GAGCGGGTGC TGCTGACCGC GCTGTGGGAC
GACTTCACCG AGACCGAGTT CTGGAACTGG CCCGGCGGCG GGGTCGACCC GGGGGAGACC
TTTGCCGAGG CGTTGGCCCG GGAGGTCTGG GAGGAGACCG GCCACGACCT GCTCGAGGCC
GTGCCGCTGG CCGTGCGGTC GTGGACCGGG ACGGGGCGGC GGTCCGACGG GGCGGAGGAG
GACTTCCACG GCATCAGCCT CGTGTGGGCG GGCCGTGTGG CGACGGTCCA CGAGCCGGTG
GTCCACGACG TCGGCGGGTC GACCACCCGG GCAGCCTGGG TGCCGGTGTC CGATCCTCGG
GTGAGTGCCA GCATCGAGCG CAACGCCGAC GACCTGCGGC GCGCCCGGGC GGTGATGGGG
GACTGA
 
Protein sequence
MTQSYHRPDP TGPIPLFVRV GEHVLALGHG VDPTWLAREL GATAREGAVP VVDHGPVDEA 
GDRPLVLDYG DGYDPADLPR PAAPGMVVES GAPPRRQRVA THAVVFDPSG ERVLLTALWD
DFTETEFWNW PGGGVDPGET FAEALAREVW EETGHDLLEA VPLAVRSWTG TGRRSDGAEE
DFHGISLVWA GRVATVHEPV VHDVGGSTTR AAWVPVSDPR VSASIERNAD DLRRARAVMG
D