Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_07570 |
Symbol | |
ID | 8372266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 761926 |
End bp | 763542 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644991043 |
Product | chaperonin GroL |
Protein accession | YP_003148578 |
Protein GI | 256824618 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.130113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.481128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA TGCTCGAATT CAACGACAAC GCCCGCAAGG CACTGGAGCG CGGCGTCAAC CAGCTCGCCG ACACCGTCAA GGTGACCCTC GGCCCCAAGG GCCGCAACGT CGTGGTCCAG CGCGCCTACG GCCAGCCGGT CATCACGAAC GACGGCGTCA CCATCGCCCG TGAGATCGAG CTGGACGACC CCTACGAGAA CCTCGGCGCC CAGCTGGTCA AGGAGGTCGC CTCCAAGACC AACGACGTCG CCGGTGACGG CACCACCACC GCCACCGTGC TCGCCCAGGC GATGGTCCGC GAGGGCCTGC GCAACGTCGC GGCCGGCGCC AGCCCCGCTG GGGTGAAGCG CGGCATGGAG CGCGCCGTCG AGGCCGTGGA CGCCCACCTC GTCTCGGCCG CCCGCCCCGT GCAGGGCAAG GAGGAGATCG CCAAGGTCGC CGCTCTCTCC GCCCAGAACC CCGAGGTCGG CGAGCTGCTC TCCGACGCCT TCGACAAGGT CGGCAAGGAC GGCGTGATCA CCGTGGAGGA GTCCTCCACC ACCGAGCTGA CCCTCGACTA CACCGAGGGC ATGCAGTTCG ACAAGGGCTT CCTCTCGCCC TACTTCGTCA CCGACTCCGA GCGCATGGAG GCCGTCCACG AGGACGCCCT GGTGCTCATC CACGGTGGCA AGATCTCCAA CATCGCCGAT CTGATGCCGG TGCTCGAGAA GGTCGTCGAG ACCTCCAAGC CGCTGGTGAT CATCGCCGAG GACGTCGAGG GCGAGGCCCT GTCCACGCTG GTGGTCAACA CGGTCCGCGG CAGCCTGAAG GTCGCGGCCG TCAAGGCCCC GGGCTTCGGT GACCGCCGCA AGGCGATGCT GCAGGACATG GCCATCCTCA CCGGTGGCGA GGTCATCTCC GAGGAGGTCG GCCTGAAGCT GAGCTCCGCC ACCCTGGAGG ACCTGGGCTC CGCCCGCCGC GTGCAGATCA CGAAGGACTC CACCACCATC ATCGACGGCG GTGGCGAGAA GTCCGCCGTG GACGAGCGCG TGGCGCAGAT CCGCAAGGAG ATCGAGAACA CCGACTCCGA GTGGGACCGC GAGAAGCTGC AGGAACGCCT GGCGAAGCTG GCCGGTGGCG TGTGCGTCAT CAAGGTCGGC GCCCACACCG AGACCGAGCT CACCGAGAAG CAGCACCGCA TCGAGGACGC CGTGTCCGCG ACGCGTGCCG CCATCGAGGA GGGCATCGTC GCCGGCGGCG GCACCGCCCT GACCCAGGCC GCCGCCGCCC TGGAGGAGCT GCTGTCCTCC ACCACCGGCG ACGAGGCCGT GGGTGTGCGC ACCGTGCAGT CGGCCCTCAA CCAGCCGCTG CGCTGGATCG CCGAGAACGC CGGGCTGGAG GGCCACGTGG CCGCCGCCAA GGTGGCCGAG CAGAAGGCGG GCCACGGCCT GGACGCCGCC ACCGGCGAGT ACGTCGACCT GGTGGCTGCC GGCATCATCG ACCCGGTGAA GGTGACCCGC TCCGCCCTGC GGAACGCGGC CTCCATCGCG GCCCTGGTGC TGACCACCGA CACCTTGGTG GTCGACAAGC CCGCGGACGA GGACGAGTCC GGCGACGGTC ACGGCCACAG CCACTGA
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Protein sequence | MAKMLEFNDN ARKALERGVN QLADTVKVTL GPKGRNVVVQ RAYGQPVITN DGVTIAREIE LDDPYENLGA QLVKEVASKT NDVAGDGTTT ATVLAQAMVR EGLRNVAAGA SPAGVKRGME RAVEAVDAHL VSAARPVQGK EEIAKVAALS AQNPEVGELL SDAFDKVGKD GVITVEESST TELTLDYTEG MQFDKGFLSP YFVTDSERME AVHEDALVLI HGGKISNIAD LMPVLEKVVE TSKPLVIIAE DVEGEALSTL VVNTVRGSLK VAAVKAPGFG DRRKAMLQDM AILTGGEVIS EEVGLKLSSA TLEDLGSARR VQITKDSTTI IDGGGEKSAV DERVAQIRKE IENTDSEWDR EKLQERLAKL AGGVCVIKVG AHTETELTEK QHRIEDAVSA TRAAIEEGIV AGGGTALTQA AAALEELLSS TTGDEAVGVR TVQSALNQPL RWIAENAGLE GHVAAAKVAE QKAGHGLDAA TGEYVDLVAA GIIDPVKVTR SALRNAASIA ALVLTTDTLV VDKPADEDES GDGHGHSH
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