Gene Ksed_07570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07570 
Symbol 
ID8372266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp761926 
End bp763542 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content70% 
IMG OID644991043 
Productchaperonin GroL 
Protein accessionYP_003148578 
Protein GI256824618 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.130113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.481128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TGCTCGAATT CAACGACAAC GCCCGCAAGG CACTGGAGCG CGGCGTCAAC 
CAGCTCGCCG ACACCGTCAA GGTGACCCTC GGCCCCAAGG GCCGCAACGT CGTGGTCCAG
CGCGCCTACG GCCAGCCGGT CATCACGAAC GACGGCGTCA CCATCGCCCG TGAGATCGAG
CTGGACGACC CCTACGAGAA CCTCGGCGCC CAGCTGGTCA AGGAGGTCGC CTCCAAGACC
AACGACGTCG CCGGTGACGG CACCACCACC GCCACCGTGC TCGCCCAGGC GATGGTCCGC
GAGGGCCTGC GCAACGTCGC GGCCGGCGCC AGCCCCGCTG GGGTGAAGCG CGGCATGGAG
CGCGCCGTCG AGGCCGTGGA CGCCCACCTC GTCTCGGCCG CCCGCCCCGT GCAGGGCAAG
GAGGAGATCG CCAAGGTCGC CGCTCTCTCC GCCCAGAACC CCGAGGTCGG CGAGCTGCTC
TCCGACGCCT TCGACAAGGT CGGCAAGGAC GGCGTGATCA CCGTGGAGGA GTCCTCCACC
ACCGAGCTGA CCCTCGACTA CACCGAGGGC ATGCAGTTCG ACAAGGGCTT CCTCTCGCCC
TACTTCGTCA CCGACTCCGA GCGCATGGAG GCCGTCCACG AGGACGCCCT GGTGCTCATC
CACGGTGGCA AGATCTCCAA CATCGCCGAT CTGATGCCGG TGCTCGAGAA GGTCGTCGAG
ACCTCCAAGC CGCTGGTGAT CATCGCCGAG GACGTCGAGG GCGAGGCCCT GTCCACGCTG
GTGGTCAACA CGGTCCGCGG CAGCCTGAAG GTCGCGGCCG TCAAGGCCCC GGGCTTCGGT
GACCGCCGCA AGGCGATGCT GCAGGACATG GCCATCCTCA CCGGTGGCGA GGTCATCTCC
GAGGAGGTCG GCCTGAAGCT GAGCTCCGCC ACCCTGGAGG ACCTGGGCTC CGCCCGCCGC
GTGCAGATCA CGAAGGACTC CACCACCATC ATCGACGGCG GTGGCGAGAA GTCCGCCGTG
GACGAGCGCG TGGCGCAGAT CCGCAAGGAG ATCGAGAACA CCGACTCCGA GTGGGACCGC
GAGAAGCTGC AGGAACGCCT GGCGAAGCTG GCCGGTGGCG TGTGCGTCAT CAAGGTCGGC
GCCCACACCG AGACCGAGCT CACCGAGAAG CAGCACCGCA TCGAGGACGC CGTGTCCGCG
ACGCGTGCCG CCATCGAGGA GGGCATCGTC GCCGGCGGCG GCACCGCCCT GACCCAGGCC
GCCGCCGCCC TGGAGGAGCT GCTGTCCTCC ACCACCGGCG ACGAGGCCGT GGGTGTGCGC
ACCGTGCAGT CGGCCCTCAA CCAGCCGCTG CGCTGGATCG CCGAGAACGC CGGGCTGGAG
GGCCACGTGG CCGCCGCCAA GGTGGCCGAG CAGAAGGCGG GCCACGGCCT GGACGCCGCC
ACCGGCGAGT ACGTCGACCT GGTGGCTGCC GGCATCATCG ACCCGGTGAA GGTGACCCGC
TCCGCCCTGC GGAACGCGGC CTCCATCGCG GCCCTGGTGC TGACCACCGA CACCTTGGTG
GTCGACAAGC CCGCGGACGA GGACGAGTCC GGCGACGGTC ACGGCCACAG CCACTGA
 
Protein sequence
MAKMLEFNDN ARKALERGVN QLADTVKVTL GPKGRNVVVQ RAYGQPVITN DGVTIAREIE 
LDDPYENLGA QLVKEVASKT NDVAGDGTTT ATVLAQAMVR EGLRNVAAGA SPAGVKRGME
RAVEAVDAHL VSAARPVQGK EEIAKVAALS AQNPEVGELL SDAFDKVGKD GVITVEESST
TELTLDYTEG MQFDKGFLSP YFVTDSERME AVHEDALVLI HGGKISNIAD LMPVLEKVVE
TSKPLVIIAE DVEGEALSTL VVNTVRGSLK VAAVKAPGFG DRRKAMLQDM AILTGGEVIS
EEVGLKLSSA TLEDLGSARR VQITKDSTTI IDGGGEKSAV DERVAQIRKE IENTDSEWDR
EKLQERLAKL AGGVCVIKVG AHTETELTEK QHRIEDAVSA TRAAIEEGIV AGGGTALTQA
AAALEELLSS TTGDEAVGVR TVQSALNQPL RWIAENAGLE GHVAAAKVAE QKAGHGLDAA
TGEYVDLVAA GIIDPVKVTR SALRNAASIA ALVLTTDTLV VDKPADEDES GDGHGHSH