Gene Ksed_07520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07520 
Symbol 
ID8372261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp753685 
End bp755184 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content77% 
IMG OID644991038 
Productbeta-glucosidase-like glycosyl hydrolase 
Protein accessionYP_003148573 
Protein GI256824613 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.371842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.139948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACC TCCCCGTCGA GAAGCTGGCC GGGCAGGTGA TCGTCGCCGG CTACGAGGGC 
ACGGGGGCCG CCGGGGCCTC GCAGTTCGTG GCCGACGGCT TCGGGGGAGT GATCGCGTTC
GCGGCGAACG TGCCGCAGGA GGTCACGCAG CTCGCCGCGG TCAACGTGGC CGTCCAGGAG
GCCCAGGCGA GGTCCGGGCG CGACTGGCCC GCCGTCATCG GCGTGGACCA GGAGGGCGGG
CCGGTGCAGC GCCTGGGGGA GCCGGTCACG CAGTTCCCCG CCGGCATGGC CCACGGGGCC
GCGGCCGACG CAGACCTCTC GCGCGAGGTG GCCCGCCACA GCGGCGAGCA GCTGCGCGCG
CTGGGCTTCA CGATGGTGTT CGCCCCCGAC GCGGACGTGA CCGTCGGCCC CCAGGACCCC
ACCATCGGGG TCCGTTCACC GGGGTCCGAC CCCGAACGGG TGGCCGAGGT GGCACTCGCG
CTCGCGGAGG GCTACCGCGA CGCGGGCATC GTGCCGGTGG CCAAGCACTT CCCTGGCCAC
GGTGGACTGA CCACCGACAG CCACGTGGGC CTGCCCGCCA CCGACGCCAC CGCCGACGAG
CTCGCCGCCC ACGACCTCGT GCCGTTCTCC GCCCTGGCGC AGCAGGACGT GCCGGTGATG
GTCGGGCACA TCGAGGTGAC CGCCCTGGAC GACCTGCCGG CCACCCTGAG CACCCGCACC
ACGGGCCTCC TGCGCGACAC GGCCGGGCCG GACGTCCTGG TGGTGACCGA CGCGCTCAAC
ATGGGCGCGT TGGACGCCGC GGAGGAGTCC ACGGGGCAGG ACCGTTCCGT CGCGGCACTG
GCCGCCGGCT CGGACCTGCT GCTCATGCCG CCGGACCCGC GGGCGGCGCG CGCGGCCATC
GTGCAGGCCG TGGCCGACGG CACCCTGGAC GAGGAGCGCC TGCGCGACGC CGCGAGCCAC
GTGGTGGCCG CGAGCCTGCA GACCGGCGCG GAGCCCGCCC GGGGCCTCCC CGCGGCGGGC
GAGGGCCAGC CGCTGGCCGA GCGCCTGGCT GCCGCATCGC TCACCTCGCT CGGGGAGACC
TGCGACCCCG CGGTGCTGTC CTCTGGCGAC ACCGTCCGGG TGGTCGGTGG CACCGACGAG
CACCGCGCCG CCCTCGGCAG GGCCCTGCGC ACCGTTGGCC TGCGGGTGTC CGGGCAGGGC
GAGACCACTG TGCGCCTCGT CGAGGGGGGC GACTACGCCG CGGGCCAGGT GGAGGACGGG
CAGATGCCGC AGGACACCGC ATCGGGCCCG CGGGAGGGGG GCGACTCCGC CGACGTGGCC
GTCGCGCTGG ACGTGCCCTA CGGCCTCGAG GGGGTCGAGG CGCCCATCGA GCTGGCGGCC
TTCGGGGACA CGCCGGCCCA CCTCGCGGCC GTCGCGCAGT CGCTCGTGGG TGAGGTGGAG
CCCCTCGGCA CCCTGCCGGT CCCGGTGGGG GACCGGCAGG CCGGGGCCAC CTGCGGCTGA
 
Protein sequence
MADLPVEKLA GQVIVAGYEG TGAAGASQFV ADGFGGVIAF AANVPQEVTQ LAAVNVAVQE 
AQARSGRDWP AVIGVDQEGG PVQRLGEPVT QFPAGMAHGA AADADLSREV ARHSGEQLRA
LGFTMVFAPD ADVTVGPQDP TIGVRSPGSD PERVAEVALA LAEGYRDAGI VPVAKHFPGH
GGLTTDSHVG LPATDATADE LAAHDLVPFS ALAQQDVPVM VGHIEVTALD DLPATLSTRT
TGLLRDTAGP DVLVVTDALN MGALDAAEES TGQDRSVAAL AAGSDLLLMP PDPRAARAAI
VQAVADGTLD EERLRDAASH VVAASLQTGA EPARGLPAAG EGQPLAERLA AASLTSLGET
CDPAVLSSGD TVRVVGGTDE HRAALGRALR TVGLRVSGQG ETTVRLVEGG DYAAGQVEDG
QMPQDTASGP REGGDSADVA VALDVPYGLE GVEAPIELAA FGDTPAHLAA VAQSLVGEVE
PLGTLPVPVG DRQAGATCG