Gene Ksed_07500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07500 
Symbol 
ID8372259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp752285 
End bp753337 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content73% 
IMG OID644991036 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_003148571 
Protein GI256824611 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0300931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.140519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC CTGACGAACC GCTGGTGCTG GGCATCGAGA CCAGCTGCGA CGAGACCGGC 
GTGGGCATCG TGCGTGGCAC GACGTTGCTG GCCGATGCCG TGGCCAGCAG CATGGACGAG
CACGCGGCCT TCGGGGGCGT CGTGCCGGAG GTTGCCAGTC GAGCCCACCT CGAGGCGATG
GTCCCCACCA TCGAGCAGGC CTGTCTCGAT GCGGGGGTGC AGCTGCGCGA CATCGACGCC
GTGGCCGTCA CGGCCGGGCC CGGTCTGGCC GGCGCCCTGC TGGTCGGCGC GGCCAGCGCG
AAGGCGCTCG CGGTGGGCCT GGGCAAGCCC ATCTACGGGG TCAACCACCT CTCGGCCCAC
GTGGCCGTCG ACGTCGTGGA GCACGGGCCC CTGCCCGAGC CGATGATGTC GCTGCTGGTC
TCCGGCGGGC ACTCCTCGCT GCTGATGGTC CCGGACATCA CCCACGACGT CCGTCCGATG
GGGCAGACCA TCGACGATGC CGCCGGTGAG GCCTTCGACA AGGTCGCCCG GGTGCTGGGA
CTGCCCTTCC CCGGTGGGCC GCACATCGAC CGGGCCGCGC GCGAGGGCAA CCGCATCGCC
ATCGACTTCC CGCGCGGTCT GACCTCCCGG CGGGACCTGG AACGGCACGA GTTCGATTTC
AGCTTCAGCG GCCTGAAGAC CGCGGTGGCG CGCTGGGTGG AGACCCAGGA GCGCGATGGG
GTGGCCGTGC CGGTGGCGGA CGTGGCCGCC AGCTTCCAGG AGGCCGTGGT CGACGTGCTC
ACGCGCAAGG CGGTGGCCGC CTGCCGTGCC GAGGGCGTGG AGGACCTGAT GCTGGGTGGC
GGGGTCGCGG CGAACTCGCG GCTGCGGGCC CTGGCCGCCG AGCGGTGCGA GGCCGCCGGC
ATCCGGCTGC GGGTGCCGCG GCCCGGGCTG TGCACCGACA ACGGCGCGAT GGTGGCCGCC
CTGGGCTCCC AGATGGTGAT GCGGGGGCGC ACGCCCTCCG GGCTGGACCT GCCCGCGAGC
TCGTCCCAGC CGGTCACCGA GGTGCAGGTG TGA
 
Protein sequence
MSRPDEPLVL GIETSCDETG VGIVRGTTLL ADAVASSMDE HAAFGGVVPE VASRAHLEAM 
VPTIEQACLD AGVQLRDIDA VAVTAGPGLA GALLVGAASA KALAVGLGKP IYGVNHLSAH
VAVDVVEHGP LPEPMMSLLV SGGHSSLLMV PDITHDVRPM GQTIDDAAGE AFDKVARVLG
LPFPGGPHID RAAREGNRIA IDFPRGLTSR RDLERHEFDF SFSGLKTAVA RWVETQERDG
VAVPVADVAA SFQEAVVDVL TRKAVAACRA EGVEDLMLGG GVAANSRLRA LAAERCEAAG
IRLRVPRPGL CTDNGAMVAA LGSQMVMRGR TPSGLDLPAS SSQPVTEVQV