| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_07250 |
|---|
| Symbol | |
|---|
| ID | 8372234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 725008 |
|---|
| End bp | 725805 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644991011 |
|---|
| Product | ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| Protein accession | YP_003148549 |
|---|
| Protein GI | 256824589 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.307058 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG TCACCGACGG CCTGACCATC CTGCGGCGCA ACCTGATCCA GCTCAAGCGC
GTCCCCGACC TGATCCTCTT CACGCTGTTC CAGCCGATCA TGTTCATCGT GCTCTTCGGC
TACGTCTTCG GGGCGGCGAT CGGTGGGGGC GACGGGGCGA ACTACCGCAG CTTCCTCATC
GCGGGCATCT TCGCCCAGAC CATCCTGTTC GGGTCCACGA TCACCGGCTC GTCGCTGGCC
GAGGACATGC AGAAGGGCAT CATCGACCGC TTCCGCACCC TCCCCATGGC CCCTTCGGCG
GTCCTGCTGG GGCGCACCCT GGCGGACCTG ATCAACAACG TCCTGGTCCT GGTCATCATG
TCGGTGACCG GTCTGGTCAT CGGCTGGCGG ATCACCGGCG GCTTCTGGGA GGCCGTCGCC
GGGTTCGCCC TGATGCTGGG CTTCGCCTAC GCCTTCTCCT GGGTGATGGC CTTCCTGGGC
CTGCTGGTGC GCACCCCGGA GGTGCTGAAC AACGCGACCT TCATGGTCCT GTTCCCCCTG
ACCTTCATCT CCAACGCCTT CGCGCCGCCG GAGCAGTTCC CCTCGGTGCT GCGGGCGATC
GCTGGGTGGA ACCCGATCTC CACCCTCACC CAGTCCGTGC GAGACCTGTT CGGCAACAAC
ATGCCGGGCC TGGAGCCGGA CCGCTACACC TGGGCGTTGC AGCACCCCAT CGTCTACACG
CTGATCTGGC TGGTGATCCT GGTCGGGGTG TTCGCGCCGT TGGCGACCCT CCAGTACCAG
CGCGCCGGCC AGCGCTGA
|
|---|
| Protein sequence | MNLVTDGLTI LRRNLIQLKR VPDLILFTLF QPIMFIVLFG YVFGAAIGGG DGANYRSFLI
AGIFAQTILF GSTITGSSLA EDMQKGIIDR FRTLPMAPSA VLLGRTLADL INNVLVLVIM
SVTGLVIGWR ITGGFWEAVA GFALMLGFAY AFSWVMAFLG LLVRTPEVLN NATFMVLFPL
TFISNAFAPP EQFPSVLRAI AGWNPISTLT QSVRDLFGNN MPGLEPDRYT WALQHPIVYT
LIWLVILVGV FAPLATLQYQ RAGQR
|
|---|
| |