| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_07200 |
|---|
| Symbol | |
|---|
| ID | 8372229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 721007 |
|---|
| End bp | 721735 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644991006 |
|---|
| Product | ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| Protein accession | YP_003148544 |
|---|
| Protein GI | 256824584 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 0.408967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA CGACACCACA CCAGATGCCG GGAGAAGCCC TCCTGGCCAC CGACGACATC
ACGGTCAGCT ACGGCGGGGT GAACGCCCTG GCCGGGGTGA GCCTCCACAT CGCACCGCGC
GAGACGGTGG CGGTGATGGG GCCCTCCGGC TCGGGCAAGT CCACCCTCCT CCACTGCCTG
TCGGGGATCC TGACTCCCAC CCACGGCGAG GTGCGCTTCG AGGGAAGGAC CCTCTCGGGC
CTCCGTGACG CCCGCCGCAG CCACACCCGG CTGCAGCACT TCGGCTTCGT CTTCCAGGAC
CACCAGCTGA TCCCCGAGCT CCCGGCCCGG GAGAACGTCG CACTGCCGCA GATGCTCACC
GGGGTCTCCC GCAGCACCGC CCTGCGCTCC GCCGACCGGG CGCTGGAGCA GATCGGCATC
CCCGAGCTCC GCAAGCGCCG CCCCGGGGAG ATGTCCGGCG GCCAGGCCCA GCGCGTGGCC
ATCGCTCGAG CGCTCGTGGG TGAGCCGCGC GTGGTCTTCG CCGACGAGCC CAGCGGGGCG
CTCGACCAGA CCACCGGCCA CGAGGTGATG CAGCTGCTCA CGGCCACCGT CGCCCACGCC
GGCGCCGCCC TGGTCCTGGT CACGCACGAC CGGGCCGTGG CCCAGTGGTG CAACCGCCTG
GTGGAGATCC GGGACGGCCT GGTGCACACC GACCGCCTGG TCGAGGAGCC GCTGGGGGTG
GGTCGATGA
|
|---|
| Protein sequence | MNITTPHQMP GEALLATDDI TVSYGGVNAL AGVSLHIAPR ETVAVMGPSG SGKSTLLHCL
SGILTPTHGE VRFEGRTLSG LRDARRSHTR LQHFGFVFQD HQLIPELPAR ENVALPQMLT
GVSRSTALRS ADRALEQIGI PELRKRRPGE MSGGQAQRVA IARALVGEPR VVFADEPSGA
LDQTTGHEVM QLLTATVAHA GAALVLVTHD RAVAQWCNRL VEIRDGLVHT DRLVEEPLGV
GR
|
|---|
| |