Gene Ksed_07160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07160 
Symbol 
ID8372225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp715990 
End bp717012 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID644991002 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_003148540 
Protein GI256824580 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.00697906 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAA ACGCCACCTT CCGCCACTCC AACACCTCCG TGTTGTCCGT GACCGCCCTG 
CCGGCCCCCG AGGTGCACAC CTCGGCCGAG TTCGACGCCC GGATCATGGA CACCCTGCGC
CGCAACAAGC TCGTCCCCGG GGTGCTCTCC CGCCTGGTCG GCATCAAGGA GCGGCGCTGG
TGGCCCGAGG ACGTCCACTT CACCGAGGCC GCCGCCGAGG CGGGACGCCG CGCGCTGGTG
GACGCAGGCA TCAAGCCCGA GCAGGTGGGG CTGATGGTGA ACACCTCCGT GAGCCGCGAC
CACCTGGAGC CGTCCACGGC CGTGCGCATC CACGACACCC TTGGCCTGCC GCGCAGCGCG
TCCAACTTCG ACGTGACCAA CGCGTGCCTG GGCTTCGTCA ACGGCATGCA GATCGCTGCG
GCGATGATCG ACTCCGGGCA GATCGAATAC GCCCTGATCG TGAACGCCGA GACCACCCGG
CACACCCACG AGACCACCCT GAAGCGCCTG GAGAGCGAGG ACGCCACCGC CGACGACGTG
CTGCAGCAGC TCGCGACCCT CACCCTGGGC TCCGGCGCGG CCGCGATGGT GCTGGGCCGC
ACCGACAAGC ACCCCGAGGG CCACCGCTTC GTGGGGGGCG TCTCCCGCGC GGGCACAGAG
CACCACGAGC TGTGCGTGGG TGACTTCGAC CGCATGACCA CCGACTCGGT GGGCCTCCAG
GAGGCCGGCA TCGCGCTGTC CGAGGAGCTG TGGGCCGAGG CCGCCGAGGA GTTCGACTGG
CAGCACCTGG ACCGCTACGT GATCCACCAG GTCTCCACGG TGCACACCGA GCAGATCTGC
GACCGCCTGG GCCTGGACGG TGCCAAGGTG CCGCGCACCT TTCCCACCTA CGGCAACATG
GGGCCGGCCG CCGTGCCGTT CACCCTGGCC CTGGAGGCGC CGCACCTGGA GCGCGGGGAC
CGGGTGCTGC TGATGGGCAT CGGCTCCGGG CTGAACGCCT GCTGTGCCGA GATCGAGTGG
TGA
 
Protein sequence
MPGNATFRHS NTSVLSVTAL PAPEVHTSAE FDARIMDTLR RNKLVPGVLS RLVGIKERRW 
WPEDVHFTEA AAEAGRRALV DAGIKPEQVG LMVNTSVSRD HLEPSTAVRI HDTLGLPRSA
SNFDVTNACL GFVNGMQIAA AMIDSGQIEY ALIVNAETTR HTHETTLKRL ESEDATADDV
LQQLATLTLG SGAAAMVLGR TDKHPEGHRF VGGVSRAGTE HHELCVGDFD RMTTDSVGLQ
EAGIALSEEL WAEAAEEFDW QHLDRYVIHQ VSTVHTEQIC DRLGLDGAKV PRTFPTYGNM
GPAAVPFTLA LEAPHLERGD RVLLMGIGSG LNACCAEIEW