Gene Ksed_07100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07100 
Symbol 
ID8372219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp707567 
End bp709360 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content70% 
IMG OID644990996 
Product5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase 
Protein accessionYP_003148534 
Protein GI256824574 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.593719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCC GCACTGCCCC CGCCGGCCTC TCGGCCGCCC TGCTGCTCGC CCTCGCCCCG 
GCCGGTCTGC CCGCTCAGGC CGCCCCTGGC GAGATCGACC TGCAGATCCT GTCCTTCAAC
GACTTCCACG GCAACATCGA AGCCCCGGAC GACCCCACCG AGCCGGGTGG CGCCGCCAAC
CTGGCGGCCC ATCTCGACCG CTTGCGGGCC GGGACCGCGC ACTCGGCGAC CGTGGTCGGC
GGAGACAGCA TCGGCGCCTC GCCCTTCCTG TCTTCGGCCT TCCGGGACGA ACCCACCATC
GACGCCCTGA GCGCGATGGA CCTGACCGCC GTGGCGGTCG GCAACCACGA GTTCGACCAG
GGCACCGACG AGCTGCTGCG GATGGACCGT GGCGGCTGCC TCGACGACGG TGACGGCAGC
GGCGGTCGCA ACTCCTGCCC CATCCCCGGC AAGACCTTCA CCGGTGCCGC CTTCCCCTTC
CTGGCAGCCA ACGTGCTGTG GAAGGACTCC GGGGAGCCGA TGCTGCCGAG CTACGTCATC
GAGGAGTACG AGGGCGTCAA GGTCGCCTAC GTGGGTCTCG GGTTGGACGA GACCCCCTCC
ATCGTCTCGG CTGCCGGCAT CCAGGACGTG GACTTCGTGG ACGCCGCGAC CCGGGCCAAC
GAGCTCGTCC CCGAGCTGAA GGCCCAGGGC GTGGAGGCGA TGGTCGCCGT CATCCACGAG
GGTGGCACCT CCGAGAACGG CACGGACGTC TCCGGCGACG TGATGGAGTT CCACGAGCAG
CTCGATCCGG AGTACGACGT GATCGCCTCC GGCCACACGC ACACCGACTA CATCACCACC
GTGGACGGCC GGCTGATCAC GCAAGCCGGC AACTACGGCG AGCTCATCAC CAAGATCGAC
CTGCGGCTGG ACCCGCAGAC CAAGGACGTG GTGCCCGGGT CGGCCGTCGC CGAGCAGGTC
CCGGTCACCC AGGAGGTCAC GCCGGACGAG ACGGTGGCCG CGATCGTCGC GGAGTACAAG
GCGTTGATCG GTACGGTCGC CGATGAGGTG TTGGGCACCG TCAGTGCGCA GGTCACCCAC
GACCGCTACG CCGTGGCCGT CTCCCCGCTG GGCCGCCTGA TCGCCGACGC ACAGCTGGCC
GACCAGTCCG TGGTCACCGC CGGCGAGGAG CCGGTGCTGG CCCTGATGAA CCCCGGTGGC
ATCCGTGTGC CGGAGCTCGA TCAGGCCGGT GCGGACGGCT CCACCGACGG GAAGATCACG
ATGGAGGAGG CCTTCAGCGC GCAGCCGTTC AACAACTACC TGGTCTCGAT GGACCTGACC
GGCGCGCAGA TCCACCAGGT GCTGCGGGAG CAGTTCTCCG GCGAGAACGC GGAGGCCGTC
AAGGTGCTGC AGACCTCCAC CGGATTCACC TACGCCATCG ACGACACCGA CACCCCGGAG
CTGGTGCCCG GCTCGGTGCA GTTGAACGGA CAGGCGGTGG CCGATGACGG CTCGACCACC
TACCGCGTGG TGACGAACAA CTTCCTGGCC GGCGGTGGGG ACAACTTCCC GACCCTCGCG
CAGGGCGACA ACGTGTACTT CGGTGGCCTG GACATCGACG CCTTCCGCAA CTACCTGGAA
GCCGCCTCGC CGTACACCCC GGTCGACCCG CAGGTGCCCA CCACCGGTGG TCCGATCATC
GACACCGGTG TGACCGCCCC GGCCGAGGGT GCCGGCCAGG TGGCGCTCAC CGGTGGCGTG
CTGGCGATGC TGGCGGGCGC CGGCCTGCTC GGGGCGCGCC GCCGCCGCGC CTGA
 
Protein sequence
MFRRTAPAGL SAALLLALAP AGLPAQAAPG EIDLQILSFN DFHGNIEAPD DPTEPGGAAN 
LAAHLDRLRA GTAHSATVVG GDSIGASPFL SSAFRDEPTI DALSAMDLTA VAVGNHEFDQ
GTDELLRMDR GGCLDDGDGS GGRNSCPIPG KTFTGAAFPF LAANVLWKDS GEPMLPSYVI
EEYEGVKVAY VGLGLDETPS IVSAAGIQDV DFVDAATRAN ELVPELKAQG VEAMVAVIHE
GGTSENGTDV SGDVMEFHEQ LDPEYDVIAS GHTHTDYITT VDGRLITQAG NYGELITKID
LRLDPQTKDV VPGSAVAEQV PVTQEVTPDE TVAAIVAEYK ALIGTVADEV LGTVSAQVTH
DRYAVAVSPL GRLIADAQLA DQSVVTAGEE PVLALMNPGG IRVPELDQAG ADGSTDGKIT
MEEAFSAQPF NNYLVSMDLT GAQIHQVLRE QFSGENAEAV KVLQTSTGFT YAIDDTDTPE
LVPGSVQLNG QAVADDGSTT YRVVTNNFLA GGGDNFPTLA QGDNVYFGGL DIDAFRNYLE
AASPYTPVDP QVPTTGGPII DTGVTAPAEG AGQVALTGGV LAMLAGAGLL GARRRRA