Gene Ksed_07000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_07000 
Symbol 
ID8372209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp695542 
End bp696258 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID644990986 
Productphage shock protein A (IM30), suppresses sigma54-dependent transcription 
Protein accessionYP_003148525 
Protein GI256824565 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGA AGCAGACGAT CATCGGGCGG ATCAGCACCT TGGCCCGCGC CAACATCAAC 
GCCATCCTCG ACCGTGCCGA GGACCCGGAG AAGATGCTCG ACCAGATGGT GCGCGACTAC
ACCAACGCCA TCGCCGATGC TGAGGAGGCC GTGGCCCAGA CCATCGCCAG CCTGCGCATG
GCCGAGCAGG ACCTGGAGCA GGACCAGCAG GTGGCGCAGG ACTGGGGCCG CAAGGCTGCC
GCCGCCTCCT CCGAGGCCGA CCGCCTCCGC GCCGCCGGTG ACACCGCCGA GGCCGACAAG
TTCGACAACC TGGCCAAGGC TGCGCTGGAG AAGCAGATCG GCTTCGAGAA CGACGCCTCC
ACGGCCGAGC CGATGATCAC CCAGCAGCGG CAGACCGTCG AGACCCTCAA GCAGGGCCTG
GTCGAGATGC GCTCCAAGCT GGACGAGCTG AAGTCGCGCC GCGACTCGCT GGTGGCACGT
GCCCGTACCG CCGACGCCCA GCGCCAGGTC TCCGACGCGA TGGGGTCGAT CTCCATCCTC
GACCCCTCCA GCGAGCTCGG CCGCTTCGAG GAGAAGGTCC GCCGCGAGGA GGCCATGGTC
CAGGGTCGCC AGGAGGCACA GGCGGCCACC CTCGAGGGCC AGTTCGAGCA GCTGGAGGAC
TCCACCAAGA GCGCCGAGGT CGAGGCACGT CTGGCCCAGC TCAAGAACAA GGGCTGA
 
Protein sequence
MVQKQTIIGR ISTLARANIN AILDRAEDPE KMLDQMVRDY TNAIADAEEA VAQTIASLRM 
AEQDLEQDQQ VAQDWGRKAA AASSEADRLR AAGDTAEADK FDNLAKAALE KQIGFENDAS
TAEPMITQQR QTVETLKQGL VEMRSKLDEL KSRRDSLVAR ARTADAQRQV SDAMGSISIL
DPSSELGRFE EKVRREEAMV QGRQEAQAAT LEGQFEQLED STKSAEVEAR LAQLKNKG