Gene Ksed_06980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06980 
Symbol 
ID8372207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp693110 
End bp694426 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content70% 
IMG OID644990984 
Producttransposase family protein 
Protein accessionYP_003148523 
Protein GI256824563 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGAAC TTACCTTTGA TGCCCCTGAT CTGACGACCT TCGCCCGCCT GGACGAGCTT 
GGCCTCGTTG CGGTTGGCCA GCGCGTGGAG CCTGACCGGG CGGTGCTGGA ATGCCGGGTG
GTCGCGGGCG ATGACGACGC GTTCTGCCGG CACTGCGGGG CCGAGGGCGC CGCGCGGGGC
ACGGTGACCC GGCAGCTGGC GCATGAGCCG TTCGGGTGGC GGCCCACCAC GCTGCTGATC
CGGGTGCGTC GCTTCGGCTG TCAGGCGTGC CGGCGGGTGT GGCGCCAGGA CACCACTGCG
GCGGCGGACC GGCGGGCGAA GCTGTCGCGT GCAGCGGTGC GGTGGGCGCT GGTGGCCCTG
GTGACCCAGC ACCTGACTGT CGCCAGGTTG GCCGAGGCTC TGGGAGTGGC CTGGGACACC
GCCAATGACG CGGTCCTGGC CGAGGGCCGA CGGGTCCTGA TCGATGACCC CACCCGGTTT
GACGGCGTCA CCGTGGTCGG AGTGGACGAG CACGTCTGGC GCCATACCCG AAGCGGCGAG
AAGTACGTCA CCGTCGTCAT CGATCTGACC CCGATCCGCG ACGGGACGGG TCCAGCACGC
CTGCTCGACA TGGTCCAGGG GCGATCGAAG AGCACTTTCA AGACCTGGCT CGCTGCCCGC
ACCCAGGCAT GGCGCGACAG GGTGGAGGTG GTGGCGATGG ACGGGTTCAC CGGGTTCAAG
ACTGCTGCGG CCGAGGAGCT CCCCGACGCG GTCGCGGTGA TGGATCCCTT CCACGTGGTC
CGGCTCGCTG GTGACGCCCT GGACCGTTGT CGCCGACGGG TCCAGCAAGA TCTCTACGGC
CACCGCGGCC GGGCCGGCGA TCCGCTCTAC TGCGCGCGGC GGACCCTGCA CACTGGCGCC
AACCTGCTCA CCGACAAGCA GACCCGCAGG ATCGAGTCCC TGTTCGCCGA CGCCGAGCAC
GTCGAGGTCG AGGCGACCTG GGGCATCTAC CAACGCATGA TCGCCGCCTA CCGCCACCCA
GACCGGCGCG AAGGCCGGGC ACTGATGACC GCCGTGATCG ACTCGGTGAC TCGTGGCGTT
CCCACCGCCC TGAGCGAGCT CGTCACGCTC GGGCGGACGC TGACCAAGCG GGCCGAAGAC
GTACTCGCAT TCTTCGACCT GCCGGGCACG AGCAACGGCC CGACCGAGGC GATCAACGGC
CGCCTCGAGC ACCTCCGAGG GTCCGCCCTC GGCTTCCGCA ACCTGACCCA CTACGTCGCC
CGATCCCTCC TCGAAGCCGG CGGCTTCAGA CCACGACTAC ACCCTCAGAT CGGATGA
 
Protein sequence
MRELTFDAPD LTTFARLDEL GLVAVGQRVE PDRAVLECRV VAGDDDAFCR HCGAEGAARG 
TVTRQLAHEP FGWRPTTLLI RVRRFGCQAC RRVWRQDTTA AADRRAKLSR AAVRWALVAL
VTQHLTVARL AEALGVAWDT ANDAVLAEGR RVLIDDPTRF DGVTVVGVDE HVWRHTRSGE
KYVTVVIDLT PIRDGTGPAR LLDMVQGRSK STFKTWLAAR TQAWRDRVEV VAMDGFTGFK
TAAAEELPDA VAVMDPFHVV RLAGDALDRC RRRVQQDLYG HRGRAGDPLY CARRTLHTGA
NLLTDKQTRR IESLFADAEH VEVEATWGIY QRMIAAYRHP DRREGRALMT AVIDSVTRGV
PTALSELVTL GRTLTKRAED VLAFFDLPGT SNGPTEAING RLEHLRGSAL GFRNLTHYVA
RSLLEAGGFR PRLHPQIG