Gene Ksed_06880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06880 
Symbol 
ID8372197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp680700 
End bp681623 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID644990974 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003148513 
Protein GI256824553 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.0918509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGG TCCAGATCGA TGGCGCCTCC CGCTGGTTCG GGAACGTGGT CGCCGTCAAC 
GACGTGAGCT TCGACCTGCG GCCCGGGGTC ACCGGCCTGC TGGGGCCGAA CGGCGCGGGC
AAGTCCACCC TGATGGCGAT GATCGCCGGC TTCGAGACGA CCTCGGCCGG CACCATCAGC
CTCGACGGGC AACCGGTGCG CCGCAACCCG GCCATCTACC GGCGCCTCGG CATGATGCCG
GAGACCGAGT CGATGTACGA CGAGCTGACC GGGCGGGAGT TCGTCACCGC CATGGCGCGG
CTGCACAAGC TGCCCGACGC CCGGTCCGCC ACCCGCAAGG CCCTGTCCGT GGTCGACCTC
GAGGACGCCG CGGACCGCCG GATCGGCAAG TACTCCAAGG GCATGCGCCA GCGCATCAAG
ATGGCCTCGG CCCTGGTGCA CGAGCCGGAG GTGCTGCTGC TCGACGAGCC CTTCAACGGC
ATGGACCCCG GTCAGCGGGT GCGCCTCATG GGCACGCTCC ACGAGTACGC CGAGCGCGGT
GCGACCGTGC TGGTCAGCAG CCACATCCTG GAGGAGGTCC AGCAGCTGGC CGGGACGATC
GAGGTGATGC TCGCCGGCCG CCATCTCGCC TCGGGTGACT TCCGCAGCCT GCGGCGCCTG
ATGACCAACC GCCCGCACCA GTACGAGATC GTGTCCTCCG ACGACCGTGC CCTGGCCTCG
GCGCTGATCG CCGAGGAGGG CGCCGCCTCG GTGACGCTGG CCTCCGGCCT GCAGGACCAC
GTGCAGGTGC AGGTCACCGA CTTCGAGGCG TTCTCCGCCC TGCTCCCGCA GGTGGCGCGC
CGGCACGACA TCGCCCTGCA CAGTGTGCGA CCCACCGACG AGTCGCTGGA GAGCGTCTTC
GGCTACCTCG TGGAAGGACG GTGA
 
Protein sequence
MATVQIDGAS RWFGNVVAVN DVSFDLRPGV TGLLGPNGAG KSTLMAMIAG FETTSAGTIS 
LDGQPVRRNP AIYRRLGMMP ETESMYDELT GREFVTAMAR LHKLPDARSA TRKALSVVDL
EDAADRRIGK YSKGMRQRIK MASALVHEPE VLLLDEPFNG MDPGQRVRLM GTLHEYAERG
ATVLVSSHIL EEVQQLAGTI EVMLAGRHLA SGDFRSLRRL MTNRPHQYEI VSSDDRALAS
ALIAEEGAAS VTLASGLQDH VQVQVTDFEA FSALLPQVAR RHDIALHSVR PTDESLESVF
GYLVEGR