Gene Ksed_06770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06770 
Symbol 
ID8372186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp669271 
End bp670758 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content69% 
IMG OID644990964 
Producthypothetical protein 
Protein accessionYP_003148504 
Protein GI256824544 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3451] Type IV secretory pathway, VirB4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC GGGAGAGCGA GCGGCTGCAC GCATCCGTCC TCGTCGCTCC GGCCGCGGAG 
CGTCGCCGCC TGCGCACACA ACGCCGGCAG GCTGCCGCAG CACTGCGGGC CGAGCAGCAC
CGGACCGAGC AGGCCGCGGC CAGGGCGAAG GCCGACGCGG AGCGCGCCGA ACGACGCGCA
ACTACGTACC TGCCTGCCGC TGGTGAATCC GGTGCAGCCG CGCTGCGCAC ACCCGGCAGG
TTCCGGCTCC CGCGCCACCA GGACACGTCC GCGACCCTCG CCGGTGCCTA CCCGTTCGTC
GCCGAAGGCG GCCTCGGCGC CGACGGCGTC TTCGTCGGCC AAGACCTCTA CTCCGGCGGC
TCCTTCGTCT ACGACCCCTG GGTCCTCTAC GCCCGCGGGA TCATCACCGC CCCCAACGTC
GTCCTCGCCG GCATCGTGGG CTCGGGCAAG TCCTCACTGG CGAAGTCCCT CTACACACGG
TCGCTGCCGT TCGGACGCCG CGTCTACGTC CCCGGCGACC CGAAAGGCGA ACACACCCCC
GTCGCCAACG CAGTCGGCGG GAAGGCAATC GTCCTCGGCC ACGGCCTGAA CACGAGACTC
AACCCCCTTG ATGAAGGCCA CCGGCCCACC GGGCTGTCGG ATCAGGAGTG GGCCATCACG
GTCGCCGCCC GCCGCCGCGA CCTCATCGGC GCTCTCGCCG AGACCGTCCT GGCCCGCGGA
TTGACGCCCT TGGAGCACAC CGCGATCGAC CTCGCCCTCA CCGCAGTCGT CGCAGAAAAC
ACCGTGCCGA TCCTGCCGAT GGTCGTCGAC CGCATCCTCA CACCAGACGA GACCGCCGAC
GGCAGGTTGG CCGAGGACGG ACGGCTCGTC GGCCATGCCC TTCGCCGCCT GGTCGCCGGT
GACCTCGCCG GCCTGTTCGA CGGCCCCAGC ACGGTGCAGT TCGACCCCTC GCTGCCGATG
ATCAGCCTCG ACCTGTCCCG CGTCACCGAG AACTCCACAC TGATTTCGGT GCTGATGACG
TGCTCGTCGG CGTGGATGGA GTCCGCACTG CTGGACCCCA ACGGTGGGCA GCGGTGGGTG
ATCTACGACG AAGCATGGCG GCTGATGTCC CACCCCGCCT TGTTGAAACG GATGGACGCC
CACTGGCGCC TCGCCCGGCA TTACGGGATC GCGAACATGC TGATCTTCCA CAAACTCTCC
GACCTGGACA ACGTCGGCGA CGCCGGCTCC GCCATGCGCT CCCTCGCGAA CAGCCTGCTG
GCCAATGCCG AGACCCGGAT CGTCTACCGG CAGGAATCTG ACCAGCTCGG CCCCACCGCC
CAAGCACTCG GGTTGACCGG CACCGAGCAG AAGCTCCTCC CATCGTTGGG CGTTGGGCAG
GGGCTGTGGC GGATCAAGGA CCGTGCGTTC GTCACCCAGC ACCAGCTCCA TCCCGCCGAG
CTGGCACTGT TCGACACCAG CTCCCGGCTG ACCTCGGGGG TGAAGTGA
 
Protein sequence
MSARESERLH ASVLVAPAAE RRRLRTQRRQ AAAALRAEQH RTEQAAARAK ADAERAERRA 
TTYLPAAGES GAAALRTPGR FRLPRHQDTS ATLAGAYPFV AEGGLGADGV FVGQDLYSGG
SFVYDPWVLY ARGIITAPNV VLAGIVGSGK SSLAKSLYTR SLPFGRRVYV PGDPKGEHTP
VANAVGGKAI VLGHGLNTRL NPLDEGHRPT GLSDQEWAIT VAARRRDLIG ALAETVLARG
LTPLEHTAID LALTAVVAEN TVPILPMVVD RILTPDETAD GRLAEDGRLV GHALRRLVAG
DLAGLFDGPS TVQFDPSLPM ISLDLSRVTE NSTLISVLMT CSSAWMESAL LDPNGGQRWV
IYDEAWRLMS HPALLKRMDA HWRLARHYGI ANMLIFHKLS DLDNVGDAGS AMRSLANSLL
ANAETRIVYR QESDQLGPTA QALGLTGTEQ KLLPSLGVGQ GLWRIKDRAF VTQHQLHPAE
LALFDTSSRL TSGVK