Gene Ksed_06530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06530 
Symbol 
ID8372162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp645400 
End bp646260 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID644990940 
Product3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
Protein accessionYP_003148480 
Protein GI256824520 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.937537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTG TCTCCCGGAC CAGAATCGAC GCGAACGGCC CCTTTGACCG AGTCGCGGCC 
CTCGGCACGC TCACCGCGCA CGCCGTGGAC GGCCTGCACC GGCTCGACCC CGACACGACA
GAACTGACGC GATGGGTCGA CGTGCATGGC GACCCGCAGC TGGTCACTGT CTGTCTCGAT
CCGGGCGGGG CGACAGTGTC GACGGCAACT CGCGATGCGG GCGTGAGCGA CGAGATCGCC
GCACGGGTGC AGCACTGGTT CGACCTCGAC ACCGACCTGA CACCCGTCAA TGCCCGTCTG
GGTGCGGACC CGGTGCTCGC CGGGCAGGTC CGGTCGCGGC CAGGCATAAG GATCACACGC
TTCCATGCCC CATTCGAGGC AGTCATCCTC ACTGTCCTCG GCCAGCAAGT CTCCCTTGCC
GCCGGACGCC TGTTCGCAGC ACGGCTCATC GCCGCCTACG GAGACGACGC GGCCCCGGTC
CGTCAAGAAC CCGGCCTCCG AGTGTTTCCT ACGCCGGTGG CCCTCACCGC GGTGCCCGTG
GAGGAATTGC GTGCCGTGAT CGGGCTCACC GGAACCCGTG CACGCACCGT GCACGCGGTA
GCAGCGCACT TCGCCGAAAC TGCCAGGGAT GCTTCGCTGC CAGCGAGAGC AGAATTGCAC
GCCGTCCACG GGATTGGTCC TTGGACGCTG GACTACCTCG CGATCCGCGC GAGCACCGAC
GCTGACGCGT TCCCCGCGAC CGACGCCGTG CTGCGCCGCA CACTCGCAGC CATCAGCCCA
GACACCGGCC CCGAGCGTGC CGCCTCCTGG AGTCCGTATC GCAGTTACGC GGCGTCACGA
CTCTGGGCAC ACACTCTCTG A
 
Protein sequence
MSAVSRTRID ANGPFDRVAA LGTLTAHAVD GLHRLDPDTT ELTRWVDVHG DPQLVTVCLD 
PGGATVSTAT RDAGVSDEIA ARVQHWFDLD TDLTPVNARL GADPVLAGQV RSRPGIRITR
FHAPFEAVIL TVLGQQVSLA AGRLFAARLI AAYGDDAAPV RQEPGLRVFP TPVALTAVPV
EELRAVIGLT GTRARTVHAV AAHFAETARD ASLPARAELH AVHGIGPWTL DYLAIRASTD
ADAFPATDAV LRRTLAAISP DTGPERAASW SPYRSYAASR LWAHTL