Gene Ksed_06520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06520 
Symbol 
ID8372161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp644768 
End bp645403 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID644990939 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_003148479 
Protein GI256824519 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCAT CCACCCCCAC AGGACCCAGC GGCGCTGCCG AAGACCTCGG CATCGTCGTC 
GGCGACGACG GCCTGGCCCG CCCTGCGTGG GCAAGCATCG ACCCGATGCT GCGCGACTAC
TACGACACCG AATGGGGCAT GCCCGTCCGC GACGAGCAGG GCATGTACGA GCGCATCAGC
CTCGAAGCGT TCCAAGCGGG GCTGTCGTGG GCGACCATCC TGCGCAAACG TTCCGCGTTC
CGCGCCGCTT TTGACGACTT CGATCCCGAA CAGGTCGCCC GCTACGGGGC GGTGGAGATT
GAGCGACTCA TGGCTGATGC GGGCATCGTA CGCAATCAGG CGAAGATCCA CGCCGCGATC
ACCAACGCGA ACGCGACCAT CCGGCTCCGC GAGAAGGGTG GGCTGGCCGA GTTCGTGTGG
TCGTTCCAAC CCACCGAAAC GCCGGCGCCC CGGACCTTCG CGGAGATTCC TACGAAATCA
CCTGAATCGC TCGCCTTGTC CAAGGCCCTG CGCAAAGAAG GATTCGCGTT CGTTGGCCCC
ACGACGATGT ACGCGCTGAT GGAAGCGATC GGGATCATCG ACACCCACCT CATCCGCTCG
CACCGGCGCA GCTCTTCCGG CGTCTGGCCC GCATGA
 
Protein sequence
MSASTPTGPS GAAEDLGIVV GDDGLARPAW ASIDPMLRDY YDTEWGMPVR DEQGMYERIS 
LEAFQAGLSW ATILRKRSAF RAAFDDFDPE QVARYGAVEI ERLMADAGIV RNQAKIHAAI
TNANATIRLR EKGGLAEFVW SFQPTETPAP RTFAEIPTKS PESLALSKAL RKEGFAFVGP
TTMYALMEAI GIIDTHLIRS HRRSSSGVWP A