Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_06460 |
Symbol | |
ID | 8372155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 641378 |
End bp | 641875 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644990933 |
Product | RNA polymerase sigma factor, sigma-70 family |
Protein accession | YP_003148473 |
Protein GI | 256824513 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTATC CGTTCGAGCA GGCCGTTAAG GAGCATGGAC AGACCGTGCT TCGGGTGTGT CGCGCCGTAC TCGGGCCAAA CCTGGACGCA GAAGACGCCT GGTCGGAGAC GTTCCTGGCC GCGTTGCAAG CGTGGCCAGA ATTGCCCGAG GACACGAACG TTGAGGCGTG GCTGGTGCGT GTCGCTCACC GGAAGGCGAT CGACATCCTA CGAGCCCACG CACGCCATGC GATCCCCACC GGCGACCTCC CCGAACAGAC TTCGTCGCTG GGTAACCCCG GCAGTGACGA GCACGGGGTA TGGGCGGAGG TGGGCGCACT TCCGGAGCGA CAGCGCCTCG CTGTCGCCTA TCACTATCTC GGCGGGCTAC CGCACGCTGA GACGGCCGCG CTGATCGGCG GCAGTACGGA CGCGGTGCGT CGTGCGGCAG CCGACGGGAT CAAGAGTTTG AGACAGACCT ATCACGCGGG CGAGCACACG AAAGGAGCGT CCCGATGA
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Protein sequence | MKYPFEQAVK EHGQTVLRVC RAVLGPNLDA EDAWSETFLA ALQAWPELPE DTNVEAWLVR VAHRKAIDIL RAHARHAIPT GDLPEQTSSL GNPGSDEHGV WAEVGALPER QRLAVAYHYL GGLPHAETAA LIGGSTDAVR RAAADGIKSL RQTYHAGEHT KGASR
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