Gene Ksed_06460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06460 
Symbol 
ID8372155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp641378 
End bp641875 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID644990933 
ProductRNA polymerase sigma factor, sigma-70 family 
Protein accessionYP_003148473 
Protein GI256824513 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATC CGTTCGAGCA GGCCGTTAAG GAGCATGGAC AGACCGTGCT TCGGGTGTGT 
CGCGCCGTAC TCGGGCCAAA CCTGGACGCA GAAGACGCCT GGTCGGAGAC GTTCCTGGCC
GCGTTGCAAG CGTGGCCAGA ATTGCCCGAG GACACGAACG TTGAGGCGTG GCTGGTGCGT
GTCGCTCACC GGAAGGCGAT CGACATCCTA CGAGCCCACG CACGCCATGC GATCCCCACC
GGCGACCTCC CCGAACAGAC TTCGTCGCTG GGTAACCCCG GCAGTGACGA GCACGGGGTA
TGGGCGGAGG TGGGCGCACT TCCGGAGCGA CAGCGCCTCG CTGTCGCCTA TCACTATCTC
GGCGGGCTAC CGCACGCTGA GACGGCCGCG CTGATCGGCG GCAGTACGGA CGCGGTGCGT
CGTGCGGCAG CCGACGGGAT CAAGAGTTTG AGACAGACCT ATCACGCGGG CGAGCACACG
AAAGGAGCGT CCCGATGA
 
Protein sequence
MKYPFEQAVK EHGQTVLRVC RAVLGPNLDA EDAWSETFLA ALQAWPELPE DTNVEAWLVR 
VAHRKAIDIL RAHARHAIPT GDLPEQTSSL GNPGSDEHGV WAEVGALPER QRLAVAYHYL
GGLPHAETAA LIGGSTDAVR RAAADGIKSL RQTYHAGEHT KGASR