| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_06440 |
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| Symbol | |
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| ID | 8372153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | - |
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| Start bp | 636588 |
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| End bp | 640142 |
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| Gene Length | 3555 bp |
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| Protein Length | 1184 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644990931 |
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| Product | TrwC relaxase |
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| Protein accession | YP_003148471 |
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| Protein GI | 256824511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGACGG TCTCGATGCG CGTGATGTCG GCGGGCGATG GCTACAAGTA CCTGCTGCGC
ACCGTCGCGG CCGCGGACGG CGACCGTGAA CTGTCCACAC CGCTGACGAG GTACTACTTG
GAGGCGGGCA CGCCTCGGGG CCAGTGGCTG GGGTCCGGGG TCGCCTCGCT GGGCAAGGGT
CAGCTCGCGG TGGGTAATCG GGTGTCGGAG GCTCAGCTTC AGCTCTTGAT GGGGATGGGC
CGTGACCCGA TCACCGGCGA CCCGCTCGGG CATGCGTTCC CCGCCTACCG GTCGGTGTCG
GAAAAGATCG AGGCGCGGAT CGTCGACCTT GACCCGGACC TGAGTCCGGG CGTGAAGGGT
GAGGCGGTCG CGCGGATCGA GGCCGAGGAG AGCGAGCGCG GCAGGCGGCG TGCGGTGGCG
GGGTTCGATT TCACCTTCTC GGTCCCGAAG TCGGCCTCGG CGTTGTGGGC GGTTGCCGAT
GCCGGGACGC AGGCGTTGAT CGGGGAGGCG CATCATGCGG CGGTTGCGGA GGTGGTTGCG
TTCATGGAGC GCGAGGTTGC AGCCACCCGT ACTGGCGCAA CCGCCGGTGA CGGGGCCGTT
GCGCAGGTCG ATGTCACCGG TTTCGTGGCG ACGGCGTTCG ATCACTTCGA CTCCCGCGCC
GGCGACCCCC ATCTGCACAC CCACGTCGTC ATCTCCAACA AGGTCCAGAC CGCGTTCGAC
GGCAAGTGGC GGTCTCTGGA TGGGCGGCCG ATGCACGCCG CCGTGGTCGC GCTCTCGGAG
CTGCACGAAG CGGTGTTCGC CGATCACATG ACCCGCACCT TCGGCGTCGA GTGGGAGGCC
CGTGACATGG GCCGTGACCG GAACCCGGCA TGGGCGATCA GCACGGTGCC GGAGGAGCTG
GTCCAGGAGT TCTCCACTCG TGCCCGGCAC ATCGACGCCG AGAAGAACAG ACTCATCGCC
GAGTACGTCG CCCGGCACGG CCGCCAACCC TCCACAGCCA CGATCATCAA GCTGCGCGCC
CAAGCAACCC TTGCCACACG CCCGGAGAAG GCGGTGCGGT CGCTGGCCGA CCTCACCTCC
GACTGGCGGA CGCGCGCCAC CGGCGTGCTC GGCCAGGACG CCACTGGATG GGCGCGCACG
ATCACCGACA ACGACCAGCC GTTGCTGCTG CGCGCCGATG ACGTGCCCCT GGACGCGATC
GGTGAACTCG GGCAGACGGT GGTCGAGGTG GTGGGTGAGA AGCGGTCCAC GTGGCGGCGG
TGGAACCTGA TGGCCGAGGC GTCCCGGCAG ACGATGGGCT GGCGCTTCGC CACCATGCAC
GACCGGGAAG CCGTGGTTGC GATGGTCGCC GACGCCGCCG AGCAAGCCTC GTTGCGGCTG
ACGCCTCCCG ACCTCGCCAC TTCACCGGCG ACGTTCCGGC GGGGGGACGG CACGAGCGTG
TTCAGGCCCA AGCACTCGAC CGTGTTCTCC TCCGAGCTGC TGCTCGCCGC CGAAGAGCGG
CTGCTCGACC GGTCCCGCAC CCTGACCGCA CCCACCGTGC CCGTGACGAC CGTAGAGAAG
ATCACCAACA AGCCTGACCA TGAGGGGCGA ATGCTCGGTG AGGATCAGAC AGACGTGCTC
ATGAAGATCG CGGTCTCTGG CCGGATGCTC GATGTGCTGG TCGGCCCAGC TGGCGCGGGG
AAGACGACGG CAATGTCGGC CCTGCGACGG GCGTGGGAGA AGGAACACGG CAGTGGCTCC
GTGGTCGGGT TGGCGCCGTC CGCTGTCGCG GCACAGGTGC TCGCTGACGA CCTCGGGATC
AGATGCGAGA ACACCGCGAA GTGGTGGCAG AACCACCTCA TCGACGGCAC CGACTTCGAG
GCCGGTCAGC TCGTCATCAT CGACGAAGCC TCCCTCGCCG GAACCCTCTC GTTGGACCGG
ATCACCCACC TGGCCGAACG AGCCGGGGCG AAGGTGCTGC TGGTCGGCGA CTACGGCCAG
CTCCAATCCG TGGATGCCGG CGGCGCCTTC GGGCTCCTCG TCGGAGATCG GAACGAGGCG
CCCGAACTGG TCGACGTGCA CCGCTTCACC CACGAGTGGG AGAAGACCGC CTCCCTCGCA
CTGCGGCACG GCCGCACCCA GGTGATCGAC ACCTACCTCG ACCACGACCG CATCCACGAA
GGCGAGGCCG AGGCGATGAC CGACGCCGCC TACACCGCCT GGCGCACCGA CCGAGACCGA
GGTTTGGTGT CGGTGCTGGT CGCCGAGACC CGCGACGACG TGAGCGCCCT CAACCAGCGC
GCCCGCGCCG ATCTGATCCT CGACGGCACC CTGACACCAG GCCAGGAGGT AGAACTCACA
GACGGGACCA CAGCGGGGAT CGGGGACACG ATCATCACCC GCCGCAACGA CCGCCGCCTC
CGCAACGGTA AGGACTGGGT GCGCAACGGG GACACCTGGA CCATCACCGG CGTCCGCGAC
GACGGCTCGG TAACGATCCG CAAGACCGGC CGCCGGTTCG GCGGCACCAT CGTCCTCCCC
ACTACCTACG TGGCCGATCA CGTCGATCTG GGCTACGCAA TCACCGCGCA TAGGGCGCAG
GGCGTCACCG TCGACACCGC GCACGTGCTG GTGGAGCCGA CCACCACGCG GGAGAACTTC
TACGTCGCGA TGACCCGCGG CAAGCACTCC AACCGTGCCT ACGTGATCCT CGACCGCGCC
GACGAGCACG CCTACCCGCA CCCCGGCGAC AACCCCGACG CCACCGCACA TTCCGTGCTC
TACGGGGTAC TGCAACACGT CGGTGCCGAG CTGTCCGCGC ACGAGACCAT CACCGCCGAA
CAGGAGCGCT GGGGCTCTAT CGCCCAGCTC GCCGCCGAGT ACGAGACCAT CGCCGCCGCA
GCCCAACACG ACCGCTGGGC CATCCTCATC CGCAACGCCG GTCTCACCGC CGAACAGGCC
GACGCAACGA TCGAGTCCGA GGCGTTCGGC GCGCTCACTG CGGAACTGCG CCGCGCCGAG
GCCAACCACC ACGATCTCGA CACCTTGCTC CCGCGCCTGG TCACCGCGCG CGGGTTCGCC
GACGCCGACG ACATCGCCTC CGTGCTGCAC TACCGAGTCG CTCGCGCCAC CGCCCGCCCG
GCAGGCTCGG GCCGCACCCA TAAGGCGCCA CGGCTGATCG CCGGACTGAT CCCCTCCGCG
GACGGCCCGA TGACCGACGA TATGCGGCAA GCGCTCGATG AGCGGCGCGA GCTGATCGAG
GCCCGCGCAG ACGCCGTGCT CGACACTGCC CGCGACGCCG GAGAAGCCTG GACGCGGCCA
CTCGGTGACC CGCCGCGCGA CCCGCGCAAG ACGGCGGCGT GGCGACGCCA CGCCCGCACC
GTCGCCGCCT ACCGCGACCG GTACGGCATA ACCGACGACA CACCCCTCGG CCCGGCACCG
GAGAACGCGG CGCAGAAGAT CGACGCCGCC CGCGCCAGAA GTGCGCTCGT ACGGGCACGT
GACATCGCTC AGGAGCGCCC GAGAGACGCA GAGCGACGAC CGGTCGAGCA AGCTGCCCCC
ACCCGGAGCC TGTAA
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| Protein sequence | MVTVSMRVMS AGDGYKYLLR TVAAADGDRE LSTPLTRYYL EAGTPRGQWL GSGVASLGKG
QLAVGNRVSE AQLQLLMGMG RDPITGDPLG HAFPAYRSVS EKIEARIVDL DPDLSPGVKG
EAVARIEAEE SERGRRRAVA GFDFTFSVPK SASALWAVAD AGTQALIGEA HHAAVAEVVA
FMEREVAATR TGATAGDGAV AQVDVTGFVA TAFDHFDSRA GDPHLHTHVV ISNKVQTAFD
GKWRSLDGRP MHAAVVALSE LHEAVFADHM TRTFGVEWEA RDMGRDRNPA WAISTVPEEL
VQEFSTRARH IDAEKNRLIA EYVARHGRQP STATIIKLRA QATLATRPEK AVRSLADLTS
DWRTRATGVL GQDATGWART ITDNDQPLLL RADDVPLDAI GELGQTVVEV VGEKRSTWRR
WNLMAEASRQ TMGWRFATMH DREAVVAMVA DAAEQASLRL TPPDLATSPA TFRRGDGTSV
FRPKHSTVFS SELLLAAEER LLDRSRTLTA PTVPVTTVEK ITNKPDHEGR MLGEDQTDVL
MKIAVSGRML DVLVGPAGAG KTTAMSALRR AWEKEHGSGS VVGLAPSAVA AQVLADDLGI
RCENTAKWWQ NHLIDGTDFE AGQLVIIDEA SLAGTLSLDR ITHLAERAGA KVLLVGDYGQ
LQSVDAGGAF GLLVGDRNEA PELVDVHRFT HEWEKTASLA LRHGRTQVID TYLDHDRIHE
GEAEAMTDAA YTAWRTDRDR GLVSVLVAET RDDVSALNQR ARADLILDGT LTPGQEVELT
DGTTAGIGDT IITRRNDRRL RNGKDWVRNG DTWTITGVRD DGSVTIRKTG RRFGGTIVLP
TTYVADHVDL GYAITAHRAQ GVTVDTAHVL VEPTTTRENF YVAMTRGKHS NRAYVILDRA
DEHAYPHPGD NPDATAHSVL YGVLQHVGAE LSAHETITAE QERWGSIAQL AAEYETIAAA
AQHDRWAILI RNAGLTAEQA DATIESEAFG ALTAELRRAE ANHHDLDTLL PRLVTARGFA
DADDIASVLH YRVARATARP AGSGRTHKAP RLIAGLIPSA DGPMTDDMRQ ALDERRELIE
ARADAVLDTA RDAGEAWTRP LGDPPRDPRK TAAWRRHART VAAYRDRYGI TDDTPLGPAP
ENAAQKIDAA RARSALVRAR DIAQERPRDA ERRPVEQAAP TRSL
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