Gene Ksed_06090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06090 
Symbol 
ID8372118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp603242 
End bp603943 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content75% 
IMG OID644990897 
Productuncharacterized protein, copper resistance protein CopC-like protein 
Protein accessionYP_003148440 
Protein GI256824480 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC ACCACTCTGC CCGCGCCCGC CGCACCCGCG CCCTCGCCGC CGTGGGGGCG 
GCGGCCCTGA CGTGCACGTT CGCCGCACCT GCCGGGGCCC ACGACGTGCT GGAGGGTGCC
GAGCCCAGCG CCGGGGAGAC CCTCACCGAG GCCCCCGACG AACTGGTCCT GACCTACAGC
GACGCCGTGC AGCAGGTGGG CAACCGCGTC TCCGTGACCG ACTCCGCCGG CGAGGTCGTG
GCCGAGGGCG AGCCCACCGC CGACGGGTCG GTCGTGACCT TCGACCTGCC CGAGGATCTC
GCGGACGGCA GCTACACGAC CACCTGGCGG GTGGTCTCCT CCGACGGGCA CCCGATCTCC
GGCACCACGG ACTTCACCGT GGCAGCCGAC AGCGACGATG CGGGGAGCTC GCCCGCGGAG
AGCTCGGAGC CTGCCGAGTC GAGCGGGGCG CCGAGTGGGA GCTCCGAGCC CGCCGGGTCC
CCCTCGTCCG AGCCGACCGC AGCGCCGAGC GACTCCGCCT CCACCGAGCC CACCGAGAGC
ACCACGACCG AGGCCACCGG CACCCCCTCG GACGAGGCGG GCTCCGACGC ACAGGACTCC
GACCAGGACT CCAGCGGCGG CCTGAGCACC ACCGGCTGGG TGGGCCTGGG TGCCCTGGCC
CTGGTGCTGC TCGCCGGAGG GGCGCTCCTG CTGCGCCGCT GA
 
Protein sequence
MTTHHSARAR RTRALAAVGA AALTCTFAAP AGAHDVLEGA EPSAGETLTE APDELVLTYS 
DAVQQVGNRV SVTDSAGEVV AEGEPTADGS VVTFDLPEDL ADGSYTTTWR VVSSDGHPIS
GTTDFTVAAD SDDAGSSPAE SSEPAESSGA PSGSSEPAGS PSSEPTAAPS DSASTEPTES
TTTEATGTPS DEAGSDAQDS DQDSSGGLST TGWVGLGALA LVLLAGGALL LRR