Gene Ksed_06000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_06000 
Symbol 
ID8372109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp595481 
End bp596281 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content77% 
IMG OID644990888 
Producthypothetical protein 
Protein accessionYP_003148431 
Protein GI256824471 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCCGG ACCGCATCGG CTTCGAGGAG GCCGAGGGCG GCGGCGTCAT CGTGCTCCGC 
GACGGGCGAC CCCAGTCCCA CGTGGACACC GACGACCCGC GGCGGCTGGA CTTCCCGTAC
ATCGCCCACC TGGCCGCGGT ACTCGACCTT GTGGCCACGC CCTCCCCGCC GGAGCGGATC
GGGGTGACCC ACGTCGGTGG CGCGGGACTG ACGCTCCCCC GCTACGTGCA GGCCACCCGG
CCCGGCTCGC CGCAGATCGT GCTGGAGCCC GACGCGGCCC TGACCGATGC GGTGCGCGCC
CGCCTCCCGC TCCCGGCGGG TCACCGCATC CGGGTGCGCC CGCAGGCCGG CCGCACCGGC
GTGGCGGGAC TCAAGGACGC CAGCGCCGAT GCCGTGGTGG TGGACGCCTT CGACGCCGGG
CGCGTACCCG ACGAGCTCGT GACCGCGGGG TTCGCGGCGG ACTGCCTCCG GGTGCTCGCG
CCCGGTGGGG TGCTGGCCAT GAACGTGGCC GACGAACCCG AGCTGGCGCG GACCGGGGAG
GTGCTCGGTG CGTGGGTGGC CGGTGGGTGG CGCGCGGAGG AGATCGCCCT CATCGGCGCC
CGGGAGGTGC TGAACAGCCG CCGGCCGGGC AATGTGGTGG TCGTCGCCCG GCGCGGTGGG
ACGGACGAGG GCACGGCGCC GGGCCGGGGC GCCCCGGCTT GGGCCACCGC TCTGGAGCGG
CGCGTGGGGC GCTCCGCCCT GCCCACCGAG GTGCGGGCCG GTGCCGTCCT GGCCCGATGG
ACGGGGCCGC CTCGCGCTTG A
 
Protein sequence
MLPDRIGFEE AEGGGVIVLR DGRPQSHVDT DDPRRLDFPY IAHLAAVLDL VATPSPPERI 
GVTHVGGAGL TLPRYVQATR PGSPQIVLEP DAALTDAVRA RLPLPAGHRI RVRPQAGRTG
VAGLKDASAD AVVVDAFDAG RVPDELVTAG FAADCLRVLA PGGVLAMNVA DEPELARTGE
VLGAWVAGGW RAEEIALIGA REVLNSRRPG NVVVVARRGG TDEGTAPGRG APAWATALER
RVGRSALPTE VRAGAVLARW TGPPRA