Gene Ksed_05940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05940 
Symbol 
ID8372103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp589801 
End bp592197 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content73% 
IMG OID644990882 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_003148425 
Protein GI256824465 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA CGCACCAGAC CACCGGCCCC GATGCGGTGA ACGCCGACCT CGACACCGTC 
ACCCACGCCG CCAGCACGCC CGAGACCGAG CAGCCCTGGG CCGACCTGGG CCTGGCCGCC
GACGAGTACG CCCGCATCCG CGAGGTCCTC GGCCGCCGCC CCACGAACGC CGAGCTGGCC
ATGTACTCGG TCATGTGGTC CGAGCACTGC TCCTACAAGT CCTCCAAGGT GCACCTGCGC
CAGTTCGGTG AGAAGCAGTC CGACGAGATG CGTGAGCACC TGCTCGTCGG CATCGGCGAG
AACGCTGGCG TGGTCGACAT CGGCGACGAC TGGGCGGTCA CCTTCAAGGT CGAGTCCCAC
AACCACCCGA GCTTCGTGGA GCCCTACCAG GGCGCCGCCA CCGGCGTGGG CGGCATCGTC
CGCGACATCA TCTCGATGGG GGCGCGCCCC ATCGCGGTCA TGGACGCCCT GCGCTTCGGC
GACCCGTCCC ACCCGGACAC GCTGCGCGTG CTGCCCGGGG TGGTCGCCGG CATCAGCGGC
TACGGCAACT CCCTGGGTCT GCCCAACATC GGCGGGGAGA CCCGGTTCGA TGCGGTGTAC
CAGGGCAACC CGCTGGTCAA CGCCCTGTGC GTGGGGGCGA TGAAGAAGCA GGACATCCAC
CTGGCCAACG CCTCGGGCGT GGGCAACCGG GTGGTGCTCT TCGGCGCCCG CACCGGCGGC
GACGGCATCG GAGGTGCCTC GGTGCTGGCC TCCGGCTCGT TCGACGCCGA CGGCCCGTCC
AAGCGCCCGA GCGTGCAGGT GGGCGACCCG TTCAGCGAGA AGGTCCTCAT CGAGTGCTGC
CTGGAGCTGT ACCGGGAGGG CCTGGTCGAG GGCATCCAGG ACCTCGGGGC GGCCGGCATC
TCGTGCGCCA CCAGCGAGCT GGCCTCCAAC GGCGAGGGCG GCATGCACAT CGAGCTCACC
AGCGTGCTGC TGCGCGACCC CACCCTGAAC GCCGGCGAGA TCCTCATGTC GGAGTCGCAG
GAGCGCATGA TGGCCGTGGT GACGCCGGAG AACGCCGAGG CCTTCGAGGC GGTCATGGCC
CGCTACGAGG TCGAGTACTC CTGGCTCGGC GAGGTCACCG ACACCGGGCG GCTGGTCATC
GACTGGCAGG GCGAGACCAT CGTCGACGTG GACCCGCGCA CCGTGGCCCA CGACGGCCCG
GTCTACGAGC GCCCCTACGC CCGCCCGGAG TGGCTCGACG CGGTGCAGGC CGACACCGTC
ACGGCGGCCG GCCTGGAGCG CCCCGGCTCC GCAGCCGACC TGCGTGCCAC GCTGCTCGAC
CTGCTCGGCA GCCCGAACCT GGCGGATGCG TCCTGGATCA CCGACCAGTA CGACCGCTAC
GTGCAGGGCA ACACCGCATC GGCCATGCCG GACGACGCCG GCATCGTGCG CGTGGACGAG
CAGACCGGCC GCGGCGTGGC CGTCTCGACC GACTGCAACA ACCGCTTCAG CTACCTGGAC
CCCTACGCCG GGGCGCAGCT GAGCCTGGCC GAGGCCTTCC GCAACGTGGC GGCCAGCGGT
GCGGCGCCGC GGGCGGTCTC GGACTGCCTG AACTTCGGCT CCCCGGAGGA GCCGGGCACC
ATGTGGCAGT TCGCCGAGGC CATCCGCGGC CTGGCCGACG GTTGCCTGGA GCTGGGCATC
CCGGTGACCG GCGGCAACGT GTCGCTGTAC AACTCCACCG GGGACACCGC CATCCACCCC
ACCCCGCTGG TCGCGGTGCT CGGTGTGCTG GACGACGTGG CCCGCCGCAT CCCCACCGCC
TGGCGGGCCG CCGGGCTGGA CCTGGTGCTG CTCGGCGAGA CCCGCGACGA GCTGGACGGC
TCGGCCTGGG CCGGGCTGCA CGGACACCTC GGCGGTGTGC CGCCGCAGGT GGACCTCGCG
GCCGAGCGCC GGCTGGGCGA GCTCCTGGGC CGCGCGGCGG ACGAGGGCCT GGTGGCCGGC
TCGCACGACC TCTCCGAGGG GGGCCTCGCG GTCGCCCTGG CCGAGGGCGT GGAGCGCCAC
GGCACCGGTG CCCGGGTGGA CCTGGCCTCG CTGCTGGGTG CTGGTGGCGC TGCGGCGGGC
GAGGGCGCGC TCGATGCCGC TGCGGCGCTG TTCTCGGAGT CCGGCGGCCG CGTGCTGGTC
GCCGTCGCGC CCGAGCACCG CGAGGCCTTC GACGCCCTGG TCGCCGAGCA CGGCGTGCCG
GCCGTCGCGC TCGGCACCAC CACCCCCGGC GACTCCTTGC GGGTGGAGAC GGGCGCGGGC
GAGCTGGTGC TCACCGCATC GGAGATCTCC ACGGCGCGCC AGCGGACCTT CCGCGAGCTG
CTCGCCGGGG ACGAGGCCGT CGTCGAAGCC GCCGTTGCCG AGGCGCACGG GCACTGA
 
Protein sequence
MTPTHQTTGP DAVNADLDTV THAASTPETE QPWADLGLAA DEYARIREVL GRRPTNAELA 
MYSVMWSEHC SYKSSKVHLR QFGEKQSDEM REHLLVGIGE NAGVVDIGDD WAVTFKVESH
NHPSFVEPYQ GAATGVGGIV RDIISMGARP IAVMDALRFG DPSHPDTLRV LPGVVAGISG
YGNSLGLPNI GGETRFDAVY QGNPLVNALC VGAMKKQDIH LANASGVGNR VVLFGARTGG
DGIGGASVLA SGSFDADGPS KRPSVQVGDP FSEKVLIECC LELYREGLVE GIQDLGAAGI
SCATSELASN GEGGMHIELT SVLLRDPTLN AGEILMSESQ ERMMAVVTPE NAEAFEAVMA
RYEVEYSWLG EVTDTGRLVI DWQGETIVDV DPRTVAHDGP VYERPYARPE WLDAVQADTV
TAAGLERPGS AADLRATLLD LLGSPNLADA SWITDQYDRY VQGNTASAMP DDAGIVRVDE
QTGRGVAVST DCNNRFSYLD PYAGAQLSLA EAFRNVAASG AAPRAVSDCL NFGSPEEPGT
MWQFAEAIRG LADGCLELGI PVTGGNVSLY NSTGDTAIHP TPLVAVLGVL DDVARRIPTA
WRAAGLDLVL LGETRDELDG SAWAGLHGHL GGVPPQVDLA AERRLGELLG RAADEGLVAG
SHDLSEGGLA VALAEGVERH GTGARVDLAS LLGAGGAAAG EGALDAAAAL FSESGGRVLV
AVAPEHREAF DALVAEHGVP AVALGTTTPG DSLRVETGAG ELVLTASEIS TARQRTFREL
LAGDEAVVEA AVAEAHGH