| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_05820 |
|---|
| Symbol | |
|---|
| ID | 8372091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 582517 |
|---|
| End bp | 583077 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644990871 |
|---|
| Product | Pyridoxamine 5'-phosphate oxidase |
|---|
| Protein accession | YP_003148414 |
|---|
| Protein GI | 256824454 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.300525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TGCGCAACCG CCTCCGTGCC CTGCCGTCCT TCCCGGCGGA CCTGCCCGAG
TTGGACCCCG ACCGGGCCCC GGCCAGCCCG CACGACCTCT TCGCGAGCTG GCTGGGCGAC
GCCATCGAGG CGGGCGAGCG CCAACCGCAC GGCATGACCC TGGCCACCGT CCGGGACGAC
GGCACCCCGG TGGCCCGCAC GCTGATCCTC AAGGACGTCG ACACCGACGG TTACCACTTC
TCCACGCACC GCAGCAGCCG CAAGAGCCAG CAGCTGGCCA CCATCCCGCG GGCCTCGATG
CTGTTCTGGT TCAAGGAGGC CGGGCGCACG GTCCGCATCA CCGGCGGGGT GCAGGAGCTG
GGCCGCGAAG CCTCGGAGCG GGACTGGCAG GGTCGGCCGT CCTACGACGG TGAACCGAAC
CCGGACTGGC AGCTCTACGC ACTTCTGCCC GAGGAGTTCG AGTTCATGCA GGCCCGCGAG
GACCGCCACC ACACCCGCCT GGAGTACCTG CTCGGTGCGG CCGGGTGGGA GCGCGGCCTC
GTCCGCACCC CCGCCGGCTG A
|
|---|
| Protein sequence | MTTLRNRLRA LPSFPADLPE LDPDRAPASP HDLFASWLGD AIEAGERQPH GMTLATVRDD
GTPVARTLIL KDVDTDGYHF STHRSSRKSQ QLATIPRASM LFWFKEAGRT VRITGGVQEL
GREASERDWQ GRPSYDGEPN PDWQLYALLP EEFEFMQARE DRHHTRLEYL LGAAGWERGL
VRTPAG
|
|---|
| |