Gene Ksed_05780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05780 
Symbol 
ID8372087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp579632 
End bp580387 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content76% 
IMG OID644990867 
ProductNAD-dependent protein deacetylase, SIR2 family 
Protein accessionYP_003148410 
Protein GI256824450 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.577627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC TCGTCCCCGA TGCGGTGGTC GACCTGGCGC GCTCGGCCCG GCGGGTGCTC 
GTGCTCACCG GGGCCGGAGC ATCGGCCGAG TCCGGCGTGC CCACCTTCCG GGACGCCGCG
ACCGGGCTGT GGGCGCGCTT CGACCCGATG GAGCTCGCGA CCCCGGAGGC GTGGGCGGCT
GACCCCGCCC AGTGCTGGGC CTGGTACGCG TGGCGGGCGC ACCTGGTGCG GGGTGCGGAG
CCGAACGCGG GGCACCGCGC CATCGCGGCC TGGCAGCAGC ACGAGGGGGT GGACCTGCGC
GTCAGCACCC AGAACGTGGA CGGCCTGCAC GAGCGGTCCG GCGCCGAGGT GTTGGCCCAC
GTGCACGGCG ACCTGTTCGC GCTGCGGTGC GCACGGTGCG GGGCGGCGTC CGACGCGGAG
TACCCGCCGG TGCCCGAGCC CGTGGAGCGG CTGGAGCCAC CGGTGTGCGG GCGCTGCGGT
GGTCTGGTGC GGCCGGGCGT GGTGTGGTTC GGGGAGATGC TCCCCGCGGG GGCGCTGGAG
GCCACGGTGA CCGCTGCGGA GTGGGCCGAG ATGGTTGTGG TGGTGGGCAC CTCCGGGATG
GTCTACCCGG CGGCTGCCGT CCCGGGCATC GCGCGGGAAG CCGGGGTTCC CGTGGTGGAG
GTGAACCCCG CGGGGTCCTC GCTGCCGGAC GGGGCGGACC ACGTCATCGA GGCGCCCGCC
GGCCAGGCGC TTCCGGCGCT CGTCGCCGCC TTGTAG
 
Protein sequence
MSGLVPDAVV DLARSARRVL VLTGAGASAE SGVPTFRDAA TGLWARFDPM ELATPEAWAA 
DPAQCWAWYA WRAHLVRGAE PNAGHRAIAA WQQHEGVDLR VSTQNVDGLH ERSGAEVLAH
VHGDLFALRC ARCGAASDAE YPPVPEPVER LEPPVCGRCG GLVRPGVVWF GEMLPAGALE
ATVTAAEWAE MVVVVGTSGM VYPAAAVPGI AREAGVPVVE VNPAGSSLPD GADHVIEAPA
GQALPALVAA L