Gene Ksed_05760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05760 
Symbol 
ID8372085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp576728 
End bp578995 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content74% 
IMG OID644990865 
ProductDNA/RNA helicase, superfamily I 
Protein accessionYP_003148408 
Protein GI256824448 
COG category[R] General function prediction only 
COG ID[COG3973] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.594948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCACGT CCCGTGAGCA GGACCCCCTC GTCGAGCAGC AGATCGCCCT CGAGCAGGCG 
CACGTCGATC GCGTGCACGC CGAGCTGGCC AAGGCCGCCG AGCGGGCCGG CCTGGTGGAG
GCCGAGGGGC TGGCCCGCGG GCGCACCATG CGCACCGGCG ACGTCCGCGA CGAGGAGATG
TCCGGCCTGT TCGAGCGCGA CGCGCTGGTG TTCTCCAGCC ACAAGCGCCG CACCTCCCTG
GAGATGGAGC ACGAGGGCCT GGTCTTCGGG CGCCTCGACC TGGACCACTC GATGCCGGAT
GCCGGCCCCG CGGAGGGCGA GGCACCCACC GTCGAGGAGG TGCGCTACAT CGGCCGCCTG
GGCGTGCGCG ACGACGACTA CGAGCCGCTG GTGGTCGACT GGCGCGCCCC GGCCGCGAGC
GCCTTCTACC GCGCCACGCC CGTGCAGCCC CACAAGGTGG TGCGCCGTCG CGTGCTGCGC
TGCCGCGCCG AGCAGGTCAT CGGCATCGAG GACGACCTGA TGGTGGCCGA GCCGCCGGAG
GACCTGCCGG TGGTCGGCGA CGGCGCCCTG ATGGCCGCCC TCACCCGCTC CCGCGGTGGG
CGCATGCGGG ACATCGTGGC CACCATCCAG CAGCACCAGG ACGAGGCCAT CCGCGCCGAG
GCCCGCGGCG TCACCACCAT CACCGGTGGC CCGGGCACCG GAAAGACGGT GGTTGCCCTG
CACCGCGCCG CCTACCTGCT CTACACCGAC CGGCGCCGCT ACGAGCACGG TGGCGTGCTC
GTCATCGGTC CGAGCGCGGC GTACACCGCC TACATCGAGC GCGTGCTGCC CACGCTGGGT
GAGGACTCGG TGGCCCTGCG CGCCGCCGGT GACGTGGTGG ACGGCATGAC CGGCCTGCGC
CTGGACGCCC CGGAGGCCGC GCGCGTGAAG GGGATGCTGC GCATCCGCAA GGTCCTCGCC
CGCGCCGCGA AGGCCCCGGC CCCCGACGCC CCGGTGGAGC TGCGCTGCTT CGTCTCCGGG
CACGCCATCC GGCTGGTGGA GCAGGACCTG CGACGCATCC GCAACACCGT GCTGCGCGGC
GCCAAGCGCA ACGACGCCGC CGCGGCAGCC CGCGAGATGC TCTCCCAGGC CGCCTGGACC
CAAGCACGCT CGCAGACCTC CGGCGAGATC CTGCGCGAGG ACCGGGAGCG CTTCTTCAGC
CGCTTCGAGG ACTCCCGCGA GGTGGATGCC TTCATGGAGT CCTGGTGGCG TCCCGTGGAC
CCGCGCGAGG TGGTGCTCTG GCTCGCCGAC GCCGAGCAGC TCGCCGGCTG GGCCCGGGAC
GCGCTGGACG CCGAGGAGCA GGCCGCTCTC GCCGCATCGA TGCAGGTGGC CCTGGACACG
GGCACCTGGT CGGTGGCCGA CGCGGCCCTG GTGGACGAGG TCTCCGCCCG CATCGGGCAG
CCGCAGGTGG AGGTCGACAC CGAGCGGGGC TTCTACGAGG TCGAGGAGCT GGACGACGCC
AGCCAGTACG GCGTCTCCGC GCTGAAGGGT GGCGAGGGCC GCGCCGAGAC CGAGTACCAC
CAGGTCTCCC CCACCACAGC CTGGGAGAAG CTGCTGTACG GCACCGTGGA GCAGCCCGCG
ACGTACGCCC ACCTGCTGGT GGACGAGGCG CAGGACCTCT CCCCGATGCA GTGGCGCATG
CTGGGCCGCC GTGGCCGGAC CGCGTCGTGG ACCGTGGTGG GTGACGCGGC GCAGGCCAGC
TGGCCCGATG CGGCGGAGGC CGAAGAGGCC CGCGACGAGA CCTTCGGCGC CAAGCCGCGC
CGCTCGTTCC ACATGGACAC GAACTACCGC AACGCCAGCG AGATCTTCGC CTACGCCGCG
GAGTACATCC GCCGCCACGA GCCGGAGGCG GACATCCCGA ACGCGGTGCG CGAGACCGGG
GTCCAGCCAC GGGAGGTGGG CGTCACGGCA ACGGGGAAGG ACTCCGGCGC GTGGGCGACC
GCGGCCGTGG AGGCGGCGCG CGAGCTGGTC GATGAGGTGG ACGGCGCGAT CGCGGTGATC
ACCCCGGCGG TCCACCGGGT GGACGTGGAG GCGGCGCTGG AGCCGCTGCG CGGCGAGCAC
CCGCGCGTGG TGGCGATCGA CCCGATGAGC ACCAAGGGCC TGGAGTACGA CGCGACCGTG
GTGGTGGACC CCGAGGAGAT CGTGGCCGAG TCCCCCGGCG GCGCGCGTGT GCTGTACGTG
GTCTTCACTC GCGCCGCGCA CCGGATGGTT GTGCTGGCCG AGGGGTGA
 
Protein sequence
MSTSREQDPL VEQQIALEQA HVDRVHAELA KAAERAGLVE AEGLARGRTM RTGDVRDEEM 
SGLFERDALV FSSHKRRTSL EMEHEGLVFG RLDLDHSMPD AGPAEGEAPT VEEVRYIGRL
GVRDDDYEPL VVDWRAPAAS AFYRATPVQP HKVVRRRVLR CRAEQVIGIE DDLMVAEPPE
DLPVVGDGAL MAALTRSRGG RMRDIVATIQ QHQDEAIRAE ARGVTTITGG PGTGKTVVAL
HRAAYLLYTD RRRYEHGGVL VIGPSAAYTA YIERVLPTLG EDSVALRAAG DVVDGMTGLR
LDAPEAARVK GMLRIRKVLA RAAKAPAPDA PVELRCFVSG HAIRLVEQDL RRIRNTVLRG
AKRNDAAAAA REMLSQAAWT QARSQTSGEI LREDRERFFS RFEDSREVDA FMESWWRPVD
PREVVLWLAD AEQLAGWARD ALDAEEQAAL AASMQVALDT GTWSVADAAL VDEVSARIGQ
PQVEVDTERG FYEVEELDDA SQYGVSALKG GEGRAETEYH QVSPTTAWEK LLYGTVEQPA
TYAHLLVDEA QDLSPMQWRM LGRRGRTASW TVVGDAAQAS WPDAAEAEEA RDETFGAKPR
RSFHMDTNYR NASEIFAYAA EYIRRHEPEA DIPNAVRETG VQPREVGVTA TGKDSGAWAT
AAVEAARELV DEVDGAIAVI TPAVHRVDVE AALEPLRGEH PRVVAIDPMS TKGLEYDATV
VVDPEEIVAE SPGGARVLYV VFTRAAHRMV VLAEG