Gene Ksed_05680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05680 
Symbol 
ID8372077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp568299 
End bp569747 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content76% 
IMG OID644990857 
Productacetyl-CoA carboxylase beta subunit 
Protein accessionYP_003148400 
Protein GI256824440 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.549836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.212064 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCGCCCACGA TGCCAGTGGC CAGACGCCGC GCCGCTACGG GGCCCGGGAG 
CTGGTGGACC TCGTCCTGGA CGCCGGGTCC TTCACCAGCT GGGACGAGCC GGTGGACCAC
GGCGAGGTGG GCGACTCCTA CCGCGACGCG CTGCGGCGTG CCGCGGAGAA GTCCGGCGAG
GACGAGTCGG TGCTCACCGG GCGTGGCGCC GTGCAGGGAC GCCCGGTGGC CGTCCTGGTG
GGGGAGTTCC GGTTCCTGGG CGGCTCCATC GGCCGGGCGG CGGCGCACCG CATCGTGACC
GCGGTGCGGC GGGCGACGGC CGAGGGCCTG CCCCTGTTGG CCAGCACCGC ATCGGGCGGC
ACCCGTATGC AGGAGGGGAC GCCGGCGTTC GTCACGATGA TCGAGATCTC GCGGGCGATC
ATGGAGCACC GCCGGGCCGG TCTGCCCTAC CTGGTGCACC TGCGGCACCC CACCACCGGG
GGCGTCTTCG CGTCCTGGGG ATCCCTCGGG CACGTCACCG TCGCCGAGCC GGGCGCCCTC
ATCGGCTTCC TCGGCCCGTC GGTCTACGAG GGCCTGCACG GCGAGCCCTT CCCCGAGGGC
GTCCAGCGCG CCGAGCACCT CGCGCAGCTG GGCGTGATCG ACCGGGTGGT GGCCACCGAG
GACCTGCCGC AGCTGGTCGC GACCTCGCTG GCGGTGCTGG CGGACCCGGC CACCGAGCCG
CGCTTCGAGC GGGCCCCGCT CACCGCATCG CCGCCCGAGG ACGACTGGGA GGCCGTCGTC
ACCACCCGCC GCGGCGACCG CCTGGGCGTG CGCGACCTGC TGGCGCACGC CGCGGCCGAG
ACCATCACCA TCCGCGGCAC CGAGAAGGGG GAGATCGACG ACTCGGTGCT GGTCGCGCTC
ACCCGGCTGG ACGGGCTGCC CTGCGTCGTC ATCGGCCAGG ACCGCGCGCG GCAGAGCCGT
ACCTCTCCGA TGGGACCGGC CGCCCTGCGT CAGGCGCACC GGGCCATGCA ACTGGCCGAG
GAGCTGGGCC TGCCCGTCGT GACCGTCATC GACACCCCGG GCGCCGAGCT CTCGGTCGAT
GCGGAGGAGC GCGCCATGGC CGGGGAGATC GCCCGCTGCA TCGGCCGGCT GGCGACCCTG
GAGGTGCCCA CCCTGGCGGT GATCCTGGGG CAGGGGTGCG GGGGCGGTGC GCTGGCCCTG
CTCGCCGCCG ACGAGGTGCT CGCCCTCGAG AACGCGTGGT TGGCACCCCT GCCGCCCGAG
GGGGCCAGCC TCATCGTGCA CGGCGACGTA GAGCACGCCG CGGACCTTGC GCGCTCGCAG
CAGGTGGGGG CCGGCGCGAT GGCGCGGGCC GGCATCGTGC AGGGAGTGGT CCCCGAGGCC
GGGCGGTCCA CCGAGGAGCT GGCCCGCGCC GTCGCGGCAG AGGTGGTGGG GCGGCTCAGG
AGTCGCTGA
 
Protein sequence
MTATAHDASG QTPRRYGARE LVDLVLDAGS FTSWDEPVDH GEVGDSYRDA LRRAAEKSGE 
DESVLTGRGA VQGRPVAVLV GEFRFLGGSI GRAAAHRIVT AVRRATAEGL PLLASTASGG
TRMQEGTPAF VTMIEISRAI MEHRRAGLPY LVHLRHPTTG GVFASWGSLG HVTVAEPGAL
IGFLGPSVYE GLHGEPFPEG VQRAEHLAQL GVIDRVVATE DLPQLVATSL AVLADPATEP
RFERAPLTAS PPEDDWEAVV TTRRGDRLGV RDLLAHAAAE TITIRGTEKG EIDDSVLVAL
TRLDGLPCVV IGQDRARQSR TSPMGPAALR QAHRAMQLAE ELGLPVVTVI DTPGAELSVD
AEERAMAGEI ARCIGRLATL EVPTLAVILG QGCGGGALAL LAADEVLALE NAWLAPLPPE
GASLIVHGDV EHAADLARSQ QVGAGAMARA GIVQGVVPEA GRSTEELARA VAAEVVGRLR
SR