Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_05530 |
Symbol | |
ID | 8372062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 546599 |
End bp | 550537 |
Gene Length | 3939 bp |
Protein Length | 1312 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644990842 |
Product | cell wall-binding protein |
Protein accession | YP_003148385 |
Protein GI | 256824425 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2247] Putative cell wall-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0876125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCACAC ACCGCTCTCT GCCGCGCCAT GCCACCGCAT CGGCGATCGC CATCGCCATG GCCGGCGTCA TCGCCCCCGC CACCACGGCA GCACCGGCCA CCCAGGACGC GTCGTCGGCC GGCACCTTCG CCGTCGCCCA CGGCGAGGCC CGCGACGCCG CCGCCAAGCA GGAGTTCACG GACGGTCAGT ACATCGTCAC CTTCCGTGAC CAGCCCACCG TCGCCTACGA CGGCCACCTG AAGGGGCTCG CGGCCACCAG CCCGGCCAAG GGCGAGAAGT TCGACGTGCA GAGCGCCGCG GTGCAGAAGT ACGAGAGCCA CCTGGTCCAG CGTCAGGACG CCGTGCTGGC GACCGTCGGG GCGAAGAACC CCGTCGTCCG CTACACCACG GCCCTGTCCG GCGTCGGCGT GACCCTGACC GCCGAGCAGG CCGCGGAGCT TGCCCGCAGC AGCGAGGTCA TCAGCGTGGC CCCGGAGGAG ATGCTCGAGC TCCACACCGA CACCTCGCCG GAGTTCCTCG GCCTGACCGG TGAGAACGGT GTCTGGAATA CCGGCAACGG CCTCAAGGGC GAGGGCATGG TCGTCGGCGT CATCGACTCC GGCATCTCGC ACCACAACCC GAGCTTCGCC GAGGGCGACA TGGCTCCCGC GCCGGCCGAC TGGAAGGGCG TGTGCGCCAC CGAGGCGCCG CAGGACTTCC CCTCCGACGC GTGCAACAAC AAGCTGATCG GCGCCCGCTT CTACGTGGAG GGCTTCGGCA AGAGCCGCAT CGCCGACCAC GAGTCCCTGT CCCCGCTGGA CGTGGGTGGC CACGGCTCCC ACACCGCCAG CACCGCCGCC GGCAACGAGG GCGTCACCGC CACCGTGAAC GGCGAGGAGC ACGGTGTCAT CTCGGGCATG GCCCCGATGG CCCACGTCGC GGCCTACAAG GTCTGCTGGG ACGAGAAGGG CGGCGACGGC GGCTGCAGCA GCCTCGACTC CGTCAAGGCC ATCGACGACG CGGTCGCCGA CGGCGTGGAC GTCCTGAACT ACTCGATCTC CGGCACCTCG AGCAACTACA TCGACCCGGT CGAGATCGCC TTCATGAACG CGGCCGCCAA CGGCATCTTC GTGGCTGCCT CCTCCGGTAA CTCCGGTCCC AAGGCCTCCA CGACGAACCA CCCCTCCCCG TGGCTGACCA CCGTGGCCGC CTCCACCCAC CGCATCGCCG AGAACACCCT GGTGACCGGT GACGGCGAGC GCTACATCGG CTCCTCGGTG ACCGGTGGCC TCCCCGAGGC CCCGATGATC CTGGCCCAGG ACGCCAAGGC GGCATCCGCC ACGGCCGAGG ACGCGAACCT CTGCAAGATC GGTTCCCTGG ACCCGGCCCT GGTGGCCGGC AAGATCGTGG TCTGCGACCG CGGCGTCACC GCTCGTACCG AGAAGTCCGA CGTCGTGGCC GAGGCCGGCG GCGTGGGCAT GGTGCTCATC AACCCCACCG AGAGCTCGCT GGACACCGAT GCCCACGTGG TCCCGACCGT GCACCTGTCG CACACCCACC GGGACGTCGT GCGCGCCTAC GCCTCCGGCG AGGGCGCCAC CGCCTCCATC CTGGAGACCA ACGAGGGCTC CACCACCGAG GTCCCCGAGA TCGCCGGCTT CTCCTCGCGC GGCCCGTCGC TGGGTGGCGA GGGCGACATC CTCAAGCCGG ACGTCTCGGC CCCGGGTGTC GGTGTGCTCG CGGCCTACGC CACGCCCGAG CGCGGTGCCG ACGCGTTCGG TTACAGCTCC GGTACCTCGA TGAGCTCCCC GCACATCGCC GGCCTGGCCG CCCTGGTCAA GCAGGCCAAC CCCGAGTGGT CCCCGATGGC GGTCAAGTCC GCCCTCATGA CCACCACGCG TGACCACATG AGCGCCGCCA GCAACGACCC CTTCGCCACC GGCGCCGGGT TCGTCGAGCC GCGCCGCATG CTCTCCCCGG GTCTGGTCTA CGACGCCGGT GAGCAGGACT GGTGGGACTT CCTCGCCGGT CAGGGTGTGA CCCGTGGCGG CAAGCCCGTC TCCGAGAACC CGATCGACGC CTCGGACCTC AACCAGGCCT CGATCGCGCT CGGCCAGCTG CTGGGTCAGC AGACCATCAC CCGCACGATC ACCAACACCA CGGACGCCAC GGCCACCTGG ACCGGCACCA TCGCAGGCCT GGAGGGCGTG AAGGCGACGC TGAGCCAGTC CACCGTCACC CTGGACCCGG GCGAGTCCGC GGACGTGGAG ATCACGTTCG TCGACGAGAC CCTGGCGAAG GACGCGTGGA CCAAGGGCAC GCTCACCTGG ACCGCCGCGG GCCAGAACGA CGTGCGCTCC CCCATCGCGG TGCGCGCCGG TGACCTGAAG GCGCCGCAGC TCGTCGAGGG CAAGGCGACC GACGCCACCA TCGACATCCC GATGATCTCC GGCGAGGACC GCGACGTGAG CATCGCGACC CGCGGCCTGG TCAAGGGCGA CGACGTCCGC GGCGAGGTGC GACTGCCGTC GAGCCGCGAC GACCTGGTGA TCGACGACCC GAACAACTTC CGCTACGACT TCGAGGGCTC GCGCTACTCG ACCGTGTGGA CCGAGATCAT CCCGGACGAC CCGTCGGTCG ACCTGGACCT GTACGTCACG TACAAGGGCA TGAGCCTCAA GGTCGGGCAG GCCGCCACGG CCGGCGCCGC CGAGCGGATC CTCATCCCGA CCCTGTACCT GCAGGACGAC TACACCGTCC ACGTGCAGGC CTACGACCTG GGCGGCGCGG ACTCCACCGG GTTCACGCTG CGCACCTTCG TGCTGCCGGA GAAGGGCGAC GCGGGCAACC TGACCTTCGC CAACCCCTTC TCGCTGGAGC AGGGCGTGGA GACCAACGTC CCGGGCACCA TCTCCGTGGA CGACACCTCC GCCCCGTGGT TCGGCAAGGC CACCACCACT CCCCCGAACA ACTCCTTCCG CACGCTGGCC GAGACCTACG TGCTGCTGGA GCCGGGTGAG AAGGGCGAGC CGGGTCTGGA GCGCATCGAG GGCCGGGACC GCTACGCCAC CGCTGCGGAG ATCTCCAAGA AGTTCGGCTC GTCCGACACG GTGTACATCG CCTCGGGCAT GAACTTCGCC GACGCGATGT CCGGCACCGC GGCTGCGGGC GCCGGCATCG AGGGCCTGCA GTCCCTGCCG GACGACGCGG ACAAGGAGAT CCCCGTCCTG CTGACCCGTC CGGACCGCAT CCCGCCGCAG ACCACCGAGG CCCTGCAGTC CCTCGGCGCG AAGCGCGTGG TGCTGGTGGG TGGCGAGACC GCCATCTCCG AGAAGGTCGC CGACGAGCTG GCCGCCTCCG GCCTGAGCGT CGAGCGCATC TCCGGTGCGA ACCGGTACGA GACCAGCGCC AACGTGGCCA AGTCGTTCCG CGGTGACGTG GAGACCCTCT ACATCGCCTC CGGTGACGAG AAGAACTACG CCGACGCGCT GGCCGGCAGC GCCCTGGCCG GTTCGCAGGA CGTCCCCGTC CTGCTGACCC GCCCGGACCG GGTGCTGCCC ACCACCATGC ACGCGGTGAG CACGCTCAAG CCGAAGAACA TCGTGGTGCT CGGCGGCGAG ACCGCCGTCT CGCCGGAGGT GTACGAGACC CTGGGCGCCA CCGAGCGCCT GGCCGGCTCG GACCGCTACG GGACGGCCGT GGAGATCGCC AAGGAGTTCC CCGCCAAGAG CGACTTCACG GGCTACGCGA CCGGTATGAA CTGGCCGGAC AGCCTCACCG GTGGCGCGTA CGCGGCCAAG GAGGGCGGCC CGCTGCTGCT CACCCGCCCG GACCGCCTGC CCCCGGTGGT GTCGGACTAC GTGACGGCGA ACCCGACCAC GCAGAACGTC ATCTACGGCA GCGAGGCGGC CGTCTCGCAG AACGTGGAGG ACGCGCTGCG CGGCCTGCTG GGCCTGTGA
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Protein sequence | MVTHRSLPRH ATASAIAIAM AGVIAPATTA APATQDASSA GTFAVAHGEA RDAAAKQEFT DGQYIVTFRD QPTVAYDGHL KGLAATSPAK GEKFDVQSAA VQKYESHLVQ RQDAVLATVG AKNPVVRYTT ALSGVGVTLT AEQAAELARS SEVISVAPEE MLELHTDTSP EFLGLTGENG VWNTGNGLKG EGMVVGVIDS GISHHNPSFA EGDMAPAPAD WKGVCATEAP QDFPSDACNN KLIGARFYVE GFGKSRIADH ESLSPLDVGG HGSHTASTAA GNEGVTATVN GEEHGVISGM APMAHVAAYK VCWDEKGGDG GCSSLDSVKA IDDAVADGVD VLNYSISGTS SNYIDPVEIA FMNAAANGIF VAASSGNSGP KASTTNHPSP WLTTVAASTH RIAENTLVTG DGERYIGSSV TGGLPEAPMI LAQDAKAASA TAEDANLCKI GSLDPALVAG KIVVCDRGVT ARTEKSDVVA EAGGVGMVLI NPTESSLDTD AHVVPTVHLS HTHRDVVRAY ASGEGATASI LETNEGSTTE VPEIAGFSSR GPSLGGEGDI LKPDVSAPGV GVLAAYATPE RGADAFGYSS GTSMSSPHIA GLAALVKQAN PEWSPMAVKS ALMTTTRDHM SAASNDPFAT GAGFVEPRRM LSPGLVYDAG EQDWWDFLAG QGVTRGGKPV SENPIDASDL NQASIALGQL LGQQTITRTI TNTTDATATW TGTIAGLEGV KATLSQSTVT LDPGESADVE ITFVDETLAK DAWTKGTLTW TAAGQNDVRS PIAVRAGDLK APQLVEGKAT DATIDIPMIS GEDRDVSIAT RGLVKGDDVR GEVRLPSSRD DLVIDDPNNF RYDFEGSRYS TVWTEIIPDD PSVDLDLYVT YKGMSLKVGQ AATAGAAERI LIPTLYLQDD YTVHVQAYDL GGADSTGFTL RTFVLPEKGD AGNLTFANPF SLEQGVETNV PGTISVDDTS APWFGKATTT PPNNSFRTLA ETYVLLEPGE KGEPGLERIE GRDRYATAAE ISKKFGSSDT VYIASGMNFA DAMSGTAAAG AGIEGLQSLP DDADKEIPVL LTRPDRIPPQ TTEALQSLGA KRVVLVGGET AISEKVADEL AASGLSVERI SGANRYETSA NVAKSFRGDV ETLYIASGDE KNYADALAGS ALAGSQDVPV LLTRPDRVLP TTMHAVSTLK PKNIVVLGGE TAVSPEVYET LGATERLAGS DRYGTAVEIA KEFPAKSDFT GYATGMNWPD SLTGGAYAAK EGGPLLLTRP DRLPPVVSDY VTANPTTQNV IYGSEAAVSQ NVEDALRGLL GL
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