Gene Ksed_05420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05420 
Symbol 
ID8372051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp535446 
End bp536012 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content72% 
IMG OID644990831 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003148374 
Protein GI256824414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCGG TGCTGTCTCT GCTCGCGGAC GAGGGCTACG CCCGGCTGAC CACCGCTGCG 
GTCGCGAAGC GGGCCGGGGT GTCCACAGCG ACGCTGTACC GCCGATGGCC CTCCAAGCGG
GAGCTCCTGC TGGCCGCGGC TGGTCAGATC GGCGAGGCCG AGGCGGACGA CGTCGACACC
GGCACAGTGG AGGGAGACCT GCGCGCGCTG CTGGCCCATA AGCGTGCTGT GCTCTCCGGC
AGGATCGGCG CGACACTCGT CGCGCTCGTC GGCGAGTCGG CGCATGACCG AGAACTCGCC
GCGATCGTGC GCACCAGCAT CCTCGAACCG ACGCGGGAGC ACCTGGAGGC GATCTTCGAC
CGTGCTGCCG CACGGGGCGA GGCCGTGGGA GCCGATGCCG CATCCGCGGC GCACCTGGTC
GTGGGGACGG TCTTGGCCCG CGTCGCTTTC GCGGAAGGCG CAGGACACGA CGACCTTCTG
CCGGGCAGCG ACGTGACACT CCTGATCCAG GCCATCGCCG GTGACACCGC CCAACCGGGT
CCCGGCGGAA GGGCCCGGAG GCGATGA
 
Protein sequence
MEAVLSLLAD EGYARLTTAA VAKRAGVSTA TLYRRWPSKR ELLLAAAGQI GEAEADDVDT 
GTVEGDLRAL LAHKRAVLSG RIGATLVALV GESAHDRELA AIVRTSILEP TREHLEAIFD
RAAARGEAVG ADAASAAHLV VGTVLARVAF AEGAGHDDLL PGSDVTLLIQ AIAGDTAQPG
PGGRARRR