Gene Ksed_05410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05410 
Symbol 
ID8372050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp534487 
End bp535449 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID644990830 
Productdehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 
Protein accessionYP_003148373 
Protein GI256824413 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG AGCAGACCGT GGTGATGACC GGAGCGAGCC GCGGGATCGG CCGCACGGCG 
GCGCGCCGCC TGCTCGCCGG TCGCCCGCAG GCGCATCTGG TGCTGCTGAG CCGTACCGTC
CCGCAGGCAT TGGTCGACGA GTTGCGAGCA GCCGGCGGGT CGGTGACTGT CATCCGCGCC
GACCTGTCCT CTCTGCGCAG CGTGAGTGAG GCGGCTGACG AGGTGGTGGA GCTGGTGCAT
CCCGGCCGCC TGCCACCGAT CGGAGCGCTG GTCTGCAACG CCGGGGTGCA GCTGACGAAC
GCACTGACCG AGACCGTGGA CGGCTTCGAG GCGACCTTCG CGGTCAACGT CCTGGCCAAC
CACGTCCTGC TGCGGAGGCT CCAGGGGCAC CTGCCTCCCA GCGCGCGGGT CGTCGTGACG
GTCAGCGACA CGCACTTCGG CGACCTGAGG CACAACCTCG GCATGGTGCC GGGCCCGCTG
TGGCACCCGG TCGAGACGCT GGCTCGGGTC GCCGCGTTCC CCGACCCGAG CGGCAGCACA
GCGGGGCGGG CCGCCTACTC GACCAGCAAG CTCGCCGCCA TCTACCTCGT GCACGAATAC
GCGCGCCGAC TCCCGACCGG CTTGACGATC ACCTCGTTCA ACCCGGGCTT CGTGCCCGGC
ACCGACCTCG CACGCGATGC CGATGCCATC TCCCGGTTCG CCATGCGACG GGTCATGCCC
CTGCTGACGC TCACTCCGCT GGCGACCTCC CCCAGCCTGG CAGGGCGGTT CCTGGCAGAC
GCGGTACTCG GCACCGTCTC GGCCCCGACC GGCGCGTACA TCGACCGTGA CCGAGTGGCT
GCATCATCGC CGGCGTCCTA TGACCGGCAG CGCGAGCGTG AAGCCTGGGA GGCGGTCGAA
GCGCTCACAG CCCGGTTCCT CCCCTCCGAT GCTGACCCGA ACCCAGGAAG GGAGAACCGA
TGA
 
Protein sequence
MTMEQTVVMT GASRGIGRTA ARRLLAGRPQ AHLVLLSRTV PQALVDELRA AGGSVTVIRA 
DLSSLRSVSE AADEVVELVH PGRLPPIGAL VCNAGVQLTN ALTETVDGFE ATFAVNVLAN
HVLLRRLQGH LPPSARVVVT VSDTHFGDLR HNLGMVPGPL WHPVETLARV AAFPDPSGST
AGRAAYSTSK LAAIYLVHEY ARRLPTGLTI TSFNPGFVPG TDLARDADAI SRFAMRRVMP
LLTLTPLATS PSLAGRFLAD AVLGTVSAPT GAYIDRDRVA ASSPASYDRQ REREAWEAVE
ALTARFLPSD ADPNPGRENR