Gene Ksed_05170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05170 
Symbol 
ID8372026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp513327 
End bp514892 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content70% 
IMG OID644990809 
Productformate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit 
Protein accessionYP_003148352 
Protein GI256824392 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA CGCCCGACAT GCTGGTGCCG CTGCCGGTGG TGGTCCCCCT CACCGCGGCC 
GGGATGACCC TGGTGGCCAC CCGACGCACC CGCACCCAGC GCCTGATCAC GGTCAGTGCC
CTGACGCTGA CCGTGGCCGT GAGCGCCGCG CTGGTCTACC TCAGCGACAC CCGGGGCCCG
CAGGTGGTGA ACGTCGGCGG TTGGTCGCCG CTGGAGGGGA TCGTCCTGAT CGCCGACCGG
TTGGCCTCCC TGATGCTGCT GGTCAGCGTG GTGGTCACCC TGGCGGTGGT GCTGTTCTCC
ATCGGGGAGG GCCGGTCCTC CTTCGACGAG GAGAGCGACG GTCAGGCGCC GCTGGCGATC
TTCCACCCGA CGCTGCTGGT GCTCTCGGCG GGGGTCTCCA CGACCTTCCT CTCGGGCGAC
CTGTTCCACA TGTACGTCGG CTTCGAGATG CTGCTGGCGG CCAGCTTCGT GCTGCTGACC
CTGGGTGGTA CGCGGGAGCG GGTGCGCGCC GGGGTGAACT ACGTGGCGGT GAGCCTCGTC
TCCTCCTTGG TCTTCCTGTC GGCCATCGCC TTGGTGTACG CGGCGGCGGG CACCGTGAAC
CTGGCCCACC TGGCCTACCG CCTGTCCTCG GTGGACGCCG ACACCCGGCT GGCCCTGGAG
CTGATGCTGT TGCTCGGCTT CGGCATCAAG GCCGCCGTCT TCCCGATGTC GGGATGGCTG
CCGGACTCCT ACCCGACGGC CCCCGCATCG GTCACGGCGG TGTTCGCCGG CCTGCTCACC
AAGGTGGGTG TGTACGCCGT CATCCGCACC GAGGTGCTGC TCTTCCCGGA CGACCGGGTG
AGCCCGATGC TGCTGGTCGC CGCGGCGCTG ACGATGGTGG TGGGCATCCT GGGCGCGGTC
GTGCAGGACG ACATCAAGCG GATGTTGTCG TTCACCCTGG TCAGCCACAT CGGCTTCATG
ATCTTCGGTA TTGCCCTGGG CGGGGAGCTG GGTCTCTCGG CGGCCATCTT CTACATGGTC
CACCACATCC TCATCCAGTC CTCGTTGTTC CTGGTCGCCG GCCTCATCGA GCGCCGCGGG
GGCACCACCT CGACGATGCG CCTGGACCGG CTGGCCACCA CCTCGCCGCT GGTGGCGATC
CTCTTCTTCG TGCCGGCCAT GAACCTCGGC GGCATCCCGC CCTTCTCCGG GTTCGTGGCC
AAGGTGGGAC TGATCGAGGC CGGTGTGGCC GACGGGGGCT GGCTGGCCTA CACCCTGGTG
GCCGCCTCGG TGGTCACCTC GTTGCTCACC CTGTATGCGC TCTCGCGCAC CTGGGCCCGG
GCCTTCTGGC GCCCGCCGTT CAGCGAGGAC GGGCGCCCCC TGCGGGACCT GCCGGACCCG
GACCGTGACG TCTCGCAGGC CCTGGTGCCC GGTGTGGTCA CCCCCACGAT CCTGCTGATC
GTCGTCGGGC TGGCCCTGTC GGTCGGTGCG GGCCCGCTGT TCGCCCTCAC CGACCGGGCG
GCGTACGACC TGCTGGAGAC GGTCGTCTAC ACGCAGGCGA TCTTCCCCGA GGGGGTGCCC
CAGTGA
 
Protein sequence
MNLTPDMLVP LPVVVPLTAA GMTLVATRRT RTQRLITVSA LTLTVAVSAA LVYLSDTRGP 
QVVNVGGWSP LEGIVLIADR LASLMLLVSV VVTLAVVLFS IGEGRSSFDE ESDGQAPLAI
FHPTLLVLSA GVSTTFLSGD LFHMYVGFEM LLAASFVLLT LGGTRERVRA GVNYVAVSLV
SSLVFLSAIA LVYAAAGTVN LAHLAYRLSS VDADTRLALE LMLLLGFGIK AAVFPMSGWL
PDSYPTAPAS VTAVFAGLLT KVGVYAVIRT EVLLFPDDRV SPMLLVAAAL TMVVGILGAV
VQDDIKRMLS FTLVSHIGFM IFGIALGGEL GLSAAIFYMV HHILIQSSLF LVAGLIERRG
GTTSTMRLDR LATTSPLVAI LFFVPAMNLG GIPPFSGFVA KVGLIEAGVA DGGWLAYTLV
AASVVTSLLT LYALSRTWAR AFWRPPFSED GRPLRDLPDP DRDVSQALVP GVVTPTILLI
VVGLALSVGA GPLFALTDRA AYDLLETVVY TQAIFPEGVP Q