Gene Ksed_05090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05090 
Symbol 
ID8372018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp505260 
End bp505718 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content76% 
IMG OID644990801 
Productferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase 
Protein accessionYP_003148344 
Protein GI256824384 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.884947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCACC TCCCCAGCCC CTGCTCGACC TGCCCCGGCC ACCCCGCACG GCCCGGCCCG 
TCCCGCCGCC AGGTGGTCAC CGGCGCCACC GCCGTGGCGG CCTTCGGGGT GCCCACCCTG
GCCGCCTGCA GCGACGACCC CGGCACCTCG GGTCGTCCCG GCGTGAACAC GGTCAGCGTC
GCGGCGGACG ACGTGCCGGT GGGCGGGGGC GTCATCCAGG AGGGCTGGGT GGTGACGCAG
CCCACCGAGG GCGACTTCAA GGCCTTCAGC GCCGAGTGCA CCCACCAGGG CTGTGCGGTC
AGCGAGGTCG CCGACGGGCA GATCATCTGC TCCTGCCACG GCAGCTACTT CGCCATCGCC
GACGGTGCCC CCACCGCCGG GCCCGCGACC AGGCCCCTGG CCGGCGCCGC CGTGGAGGAG
GCCGACGGGC AGCTGACGAT CAGCCCGCAG CAGGGCTGA
 
Protein sequence
MTHLPSPCST CPGHPARPGP SRRQVVTGAT AVAAFGVPTL AACSDDPGTS GRPGVNTVSV 
AADDVPVGGG VIQEGWVVTQ PTEGDFKAFS AECTHQGCAV SEVADGQIIC SCHGSYFAIA
DGAPTAGPAT RPLAGAAVEE ADGQLTISPQ QG