Gene Ksed_05080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05080 
Symbol 
ID8372017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp504521 
End bp505195 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content73% 
IMG OID644990800 
Productputative threonine efflux protein 
Protein accessionYP_003148343 
Protein GI256824383 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCC TTCTGCCACT GGCGATCGTC TGGACCCTGG GCGTGATGAG CCCGGGCCCT 
GACTTCGTCG CCATCCTGCG CACGGCGATG CGTCACGGCC ACCGCGCGGC GACCTCCACG
GCGCTGGGCG TGGTCACGGG GATCAGCGTC TGGATCGTGC TGGCGCTGGT CGGGTTGACG
GCCCTGGTGC AGGCGATCCC GGCGGTGGGG GTGGTGATGA AGGTGGCCGG TGCGGTCTTC
CTCATCGGCT ACGGGGTGTT CATCCTGTGG AGCCTCTGGC GGGCCCGGCG CGCAGCCCGG
GCCGCGCCAC TGGGGCCGGC CGCCGCCGAC GAGGCGTCGG GCGTGGCCGA GCCGGCGGCC
GCACCCTCCC CGGCCCACCC CATCACGGCC GGCGCGGCCT TCCGCCTCGG CCTGGCCACG
AACGTGGCGA ACCCCAAGGC GCTGGTCTTC TTCGGCGCGC TGTTCTCCAC GCTCCTCCCG
CCGACCCTCT CCTGGGCCGT GCGGGGCGCC GTGCTGCTGA TGATGCTGGC GATCGCCCTG
GTGTGGTTCC TCGCCCTGGC CCGGGCCGCG AGCCGCCCGC CCTTGGTGCG CCTCTACGAA
CGGGCCGGTC ACCTCATCGA TGCGGCAGCA GGGGTGGCCT TCGTCGTGCT CGGGGTGGTG
CTCCTGCTGG AGTGA
 
Protein sequence
MDLLLPLAIV WTLGVMSPGP DFVAILRTAM RHGHRAATST ALGVVTGISV WIVLALVGLT 
ALVQAIPAVG VVMKVAGAVF LIGYGVFILW SLWRARRAAR AAPLGPAAAD EASGVAEPAA
APSPAHPITA GAAFRLGLAT NVANPKALVF FGALFSTLLP PTLSWAVRGA VLLMMLAIAL
VWFLALARAA SRPPLVRLYE RAGHLIDAAA GVAFVVLGVV LLLE