Gene Ksed_05000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05000 
Symbol 
ID8372009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp494868 
End bp495518 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID644990792 
Producthypothetical protein 
Protein accessionYP_003148335 
Protein GI256824375 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC GCCGCCGCAC CACCCGCAGG AACGGCTTGG ACCCCCGCGC ATGGATCGCG 
ATCGCACTGG TTGTGGCACT CGTGATCGCC TACGGCGTGT TCACGCTCAA CCCGGCCAAC
GAGCGGGTCG ACGACATCCC GGAGCAGGCG CTGGAGGCCT ACCGGGGTGC GGCCGAGGGT
GCCGAGGACT TCGAGCACTC CTGCCACCAC CTGGACTGGC GGGTGCTCGC CGGCATCGGA
CGGGTGGAGA GCAAGCACGC CGAGGGGGGC GAGCTCACCG ACGCGGGCGT GGCCGACCCG
CCCATCTACG GCCCGCGTCT GGACGGTTCC GGCGCCGGCG GCAACACCAC CGGCATCAGC
GACACCGACG GCGGCGAGGT CGACGGTGAC ACCGAGTACG ACCGCGCGGT GGGGCCCATG
CAGTTCATCC CCACCACCTG GGAGATCCAC GGCAAGGACG GCGACGGCGA CGGGGAGGCC
GACCCGCAGA ACATCCACGA CGCCGCGCTG TCGGCCGCGA GCCTGCTGTG CGCCAACCAG
GAGATCGACC TCTCCGACGA GGACACCCTG CGCCGCGCCA TCAAGCGGTA CAACAACTCC
GACGCGTACG TGGAGAAGGT GCTCACCTGG GCGGAGCGCT ACGGGCGCTG A
 
Protein sequence
MAKRRRTTRR NGLDPRAWIA IALVVALVIA YGVFTLNPAN ERVDDIPEQA LEAYRGAAEG 
AEDFEHSCHH LDWRVLAGIG RVESKHAEGG ELTDAGVADP PIYGPRLDGS GAGGNTTGIS
DTDGGEVDGD TEYDRAVGPM QFIPTTWEIH GKDGDGDGEA DPQNIHDAAL SAASLLCANQ
EIDLSDEDTL RRAIKRYNNS DAYVEKVLTW AERYGR