Gene Ksed_04840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04840 
Symbol 
ID8371993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp479376 
End bp479849 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID644990776 
ProductDNA-binding protein, excisionase family 
Protein accessionYP_003148319 
Protein GI256824359 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.287147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CAGCAGCTGG CCCCGACGTC CGAACCTACG TGCCCGAGGG GGCGGTCGAT 
CCGGCCCTGA AGGCCATCCT GGGCGAGGGC AGTACACAAC GACCAGAACT CGTTGGCGCT
AATGGCGAGC GCCTCCTGCT GCCCGAAGCG ATGTACGACG TGCTCCGGCA GGTCGCAGAA
GCCCTCGACA AGGGCATGGG GGTCACCGTC GCGCCGAAGA ACGCCCGCCT GACCACCCAG
GAGGCGGCCG ACTTTCTCGG CATCTCGCGA CCTACCCTCG TCCGCATGCT CGAAAGAGGC
GAGATCCCCA TGGAGAAGCC AGGGCGTCAC CGGTTCGTTC GGCTGGCAGA CCTCGTCGAC
TACCAACAGC ACCAGAGGAA CCAGCGACGC GAAGCGCTCG AACGCATGGC CCTCGAAAGC
GAACGCGATG GACTCTACGA AGCCACCGAC GGTCCGCCCC GGCGCACTCG CTGA
 
Protein sequence
MTKTAAGPDV RTYVPEGAVD PALKAILGEG STQRPELVGA NGERLLLPEA MYDVLRQVAE 
ALDKGMGVTV APKNARLTTQ EAADFLGISR PTLVRMLERG EIPMEKPGRH RFVRLADLVD
YQQHQRNQRR EALERMALES ERDGLYEATD GPPRRTR