Gene Ksed_04790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04790 
Symbol 
ID8371988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp473453 
End bp474859 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content73% 
IMG OID644990771 
ProductO-acetylhomoserine sulfhydrolase 
Protein accessionYP_003148314 
Protein GI256824354 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.00316702 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC CCACCGAGCC CACCCCCACC ACCGACGCCG ACACCACCAC CGACACCACC 
GCTGATGCGG TGAGCACCCC CTCGGCCGCC CCCGACCCCT CCGCGTGGGG CCTGGCGACG
CGGTCGATCC ACGCCGGCCA GGTGCCGGAC TCGGACTCGG GCTCGCGCGC CCTGCCCATC
CACCAGACCA CCAGCTACGT CTTCGCGGAC GCAGACCAGG CCGCCAACCG GTTCGCGCTC
GCCGAGCTCG GCCCCATCTA CACGCGCCTG ACCAACCCCA CCACCGAGGC CGTGGAGAAC
CGCCTCGCCG CCCTCGACGG GGGAGTCGGC GCCCTGCTGC TGTCGTCCGG CCAGTCGGCC
ACCACGTTCT CGCTGCTCAA CCTCTGCCGT GCCGGCGACC ACGTGGTGGC GTCCGCCCAC
CTCTACGGGG GCACGCAGAA CCTGCTGGCG GTCACGCTGG AGAAGCTCGG CATCCACACC
ACCTTCGTGG ACGAGCCCAA CGACCCCGCC GCTTGGCGGG AGGCCACGCG GGGGAACACC
AAGGCCTGGT TCGCCGAGAC CATCGCCAAC CCGTCGGGCC TGGTGCTGGA CATCCGGCCC
GTCGCCGACG CCGCCCACGA GGCGGGCGTG CCGCTGATCG TGGACAACAC CGTGGCCACC
CCGGCCCTGC TGCGGCCGCT CGAGCACGGC GCGGACGTGG TGGTCTACTC GGCCACCAAG
TTCCTCGGCG GGCACGGCAC CGCGATCGCC GGGGCGATCG TGGACGGCGG CACCTTCGAC
TACGGCGCCC AGCCGGAGCG GTTCCCCAAC TTCACCGAGC CCGACCCCTC CTACAACGGC
CTGGTCTTCG CCCGCGACCT CGGGGCCGAC GGTGCCTTTG GGGTGAACCT CTCCTACGTC
CTGCGGGCGC GCGTGTGCCT GCTGCGGGAC CTCGGCTCCG CGCCGGCCCC GTTCAATGCC
TGGCTGATCG CGCAGGGCCT GGAGACGCTC ACCCTGCGGC TGCAGAAGCA TGTGGCCAAC
GCCCACGAGG TGGCCAGCTG GCTCGACGCC CGGCCCGAGG TCACCCGCGT GCAGTGGGCC
GGCCTGCCCG GTCACCCCAG CCACGAGGTC GCCCAGCGCT ACCTGCCGGA TGGCCCGGGG
TCGGTCCTCT CCTTCGAGCT CGCGGGCGGG GCCGATGCGG GGCGCGCCTT CGTCTCGGCG
TTGAAGCTCT TCAGCCACGT GGCGAACATC GGCGACGTGC GCTCGCTGGT GATCCACCCC
GCCAGCACCA CCCACGCCCA GCTGTCCGAT GCGGAGCGCC TCGCCGCCGG GGTGACCCCC
GGGCTGGTCC GCCTGAGTGT CGGCATCGAG GACAGCGCCG ACCTGCTGGC GGACCTCGAG
CGCGGCCTCG CGGCGGTGGC GCGGTGA
 
Protein sequence
MTHPTEPTPT TDADTTTDTT ADAVSTPSAA PDPSAWGLAT RSIHAGQVPD SDSGSRALPI 
HQTTSYVFAD ADQAANRFAL AELGPIYTRL TNPTTEAVEN RLAALDGGVG ALLLSSGQSA
TTFSLLNLCR AGDHVVASAH LYGGTQNLLA VTLEKLGIHT TFVDEPNDPA AWREATRGNT
KAWFAETIAN PSGLVLDIRP VADAAHEAGV PLIVDNTVAT PALLRPLEHG ADVVVYSATK
FLGGHGTAIA GAIVDGGTFD YGAQPERFPN FTEPDPSYNG LVFARDLGAD GAFGVNLSYV
LRARVCLLRD LGSAPAPFNA WLIAQGLETL TLRLQKHVAN AHEVASWLDA RPEVTRVQWA
GLPGHPSHEV AQRYLPDGPG SVLSFELAGG ADAGRAFVSA LKLFSHVANI GDVRSLVIHP
ASTTHAQLSD AERLAAGVTP GLVRLSVGIE DSADLLADLE RGLAAVAR