Gene Ksed_04620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04620 
Symbol 
ID8371971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp456236 
End bp457702 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content70% 
IMG OID644990756 
Productamino acid transporter 
Protein accessionYP_003148299 
Protein GI256824339 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCA CCCTCGCCGA GACGACCGAC CGCCCCGCCC CCGACGACGA CGGGCAGGGT 
CGCAAGGGCC TCCTCGGCGT CCCGCAGCTC ACCGCCCTGG TGGTGGGCTC CATGGTGGGA
GCGGGCATCT TCGCCCTCCC CATGAACATG GCCCAGGCTG CTGCGCCGGG CCCGCTCCTC
ATCGGCTGGG GGATCACCGG CGTCGGCATG CTCGCCCTCG CGCTGACCTT CACGCTGCTG
GCGCGCCTCG CCCCCAACCC CGACGGCGGC GTCTACGGCT ACGCCCGCGA CGGGTTCGGC
CGCTTCCTCG GCTTCTCCTC CGCGTGGGGC TACTGGATCA GCGCCTGGCT GGGCAACCTC
AGCTACCTGG TGGTCATCTT CTCCACCCTC GGCCTGTGGT TCCCGATCTT CGGCGAGGGC
ACCACGTGGG TCTCCATCGC CTGCGCCAGC GTGCTGCTGT GGGCTTACAC GTGGCTGCTG
ATGCGCGGCG TCCGCGAGGC AGCGAGCCTC AACCTGGTCG TCACCCTGGC CAAGATCGTG
CCGATCGTCG CCTTCGTGGT GCTCACCGCC ATCGCCTTCG ATTACGGCGT GTTCACCGCC
GACTTCTGGG GCCGCCAGAC TACTGGCGCC CCCATCATGG AGCAGGTTCG CGGCATGATG
TTGGTGACCG TCTGGGTGTT CCTCGGCATT GAGGGCGCGA CGGTCTACTC CGAGCGGGCC
AAGGACCGCG CCTCCATCGG GCGGGCCACC GTCATCGGCT TCGTCGGCGT GTTGGCCCTG
CTGGTCGCCG TCAACCTGCT GAGTGCCGGC ATCATGAGCC AGGCCGAGCT GGCCGAGCTG
CAGGACCCGT CCATGGCCGG GGTGCTGCGC GAGGCCGTCG GGCCGTGGGG AGCCGTCCTC
ATCGGGGTCG GCATGATCGT CTCGGTCGCC GGCGCACTGC TGGCCTGGAT GCTGCTGTGC
GCGGAGATCC TGTCGGTCAC CGCCCGCGAC GGCTCGATGC CGAAGGTCCT GGCCACCGAG
AACCGGCACG GCACCCCCAC CTGGTCGGTG CTGCTCACCA GCATCGTGCT GCAGCTGGCC
CTCGTCTACG CCGCGTTCGC GGGCTCGAGC TACTACGACA TCATCCTCAT GGCCGGCTCC
ATGATCCTGT TGCCCTACCT GCTGAGCGCC GGCTACGGCG TCGTGCTGGC CGTGCGCAAC
CGGTCGCTGG GAAAGGCCGG CATCGGCAGC ATCGTGCTGA CGCTGGTCGC CACCGTCTAC
GGCCTGTGGC TGATCTACGC CGGCGGGCTG GGCTACCTGC TCATGACCGC CCTGTTCTAC
GCCCCGGGCG TCCTGGTCTA TCTGTGGGCA CAGCGGGAGC GCGGCGAGCA CGCCATGAAG
GCGTGGGAGT GGCTCGTCTG GGCCGTCATG GCCGCAGGCT TCGTGGCTGC CGTGGTCGGC
TTCGCGACCG GGTCGCTGAC CCTCTGA
 
Protein sequence
MSSTLAETTD RPAPDDDGQG RKGLLGVPQL TALVVGSMVG AGIFALPMNM AQAAAPGPLL 
IGWGITGVGM LALALTFTLL ARLAPNPDGG VYGYARDGFG RFLGFSSAWG YWISAWLGNL
SYLVVIFSTL GLWFPIFGEG TTWVSIACAS VLLWAYTWLL MRGVREAASL NLVVTLAKIV
PIVAFVVLTA IAFDYGVFTA DFWGRQTTGA PIMEQVRGMM LVTVWVFLGI EGATVYSERA
KDRASIGRAT VIGFVGVLAL LVAVNLLSAG IMSQAELAEL QDPSMAGVLR EAVGPWGAVL
IGVGMIVSVA GALLAWMLLC AEILSVTARD GSMPKVLATE NRHGTPTWSV LLTSIVLQLA
LVYAAFAGSS YYDIILMAGS MILLPYLLSA GYGVVLAVRN RSLGKAGIGS IVLTLVATVY
GLWLIYAGGL GYLLMTALFY APGVLVYLWA QRERGEHAMK AWEWLVWAVM AAGFVAAVVG
FATGSLTL