| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04370 |
|---|
| Symbol | |
|---|
| ID | 8371947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | - |
|---|
| Start bp | 431096 |
|---|
| End bp | 432604 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644990733 |
|---|
| Product | delta-1-piperideine-6-carboxylate dehydrogenase |
|---|
| Protein accession | YP_003148276 |
|---|
| Protein GI | 256824316 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.0694384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACC CGATCCACGA CCAGGTCCGC AGCGCGCTCG AGGCGTGCGG CGTCACCGTG
CCCGAGGGCG CCGACCTGCA CGCCCGCACC CCCATCACCG GCGAGCAGCT CATGGGCCTG
CGCGCCACCA CCGACGCGGA GTACGAGACC GCCCTGACCA CCGCCGGCGA GGCCTTCACC
GCCTGGCGCG ACACCCCCGC CCCGGTGCGC GGCAACCTCG TGAAGCGATG GGGTGAGCTC
CTCACCGAGT ACAAGGACGA CCTGGCCGCG CTGGTCACCG CCGAGGCCGG CAAGATCCCG
TCCGAGGCCG CCGGTGAGGT GCAGGAGATG ATCGACATCT GCGACCTCGC AGTGGGCCTG
TCCCGCCAGC TGTTCGGCCG CACCATGCCC TCCGAGCGCC CCGGCCACCG CATGATGGAG
ACCTGGCACC CGCTGGGCCC CTGCGGCATC ATCACCGCCT TCAACTTCCC GGTGGCCCCC
TACGCGTGGA ACACCGCCGT CGCCCTGGTC TGCGGCAACA CCATCGTGTG GAAGCCCTCC
GAGGCCACCA TGCTCTCCGC GCTGGCCACC GACGCCCTGC TGGGCCGCGC CGCGAAGGAC
GTCGGCGCCC CCGAGGGCCT GCACCACGTG GTGATCGGCG ACCGCACGCT GGGCGAGAAG
ATGTCCGACG ACGAGCGCCT GCCGCTCATC TCGGCCACCG GCTCCACCCG CATGGGCTCC
GAGGTCGGCC CGCGCGTGGC GGCCCGCTTC GGCCGCACCG TGCTGGAGCT CGGCGGCAAC
AATGCCGCCA TCGTCGCCCC CTCGGCGGAC CTCGACCTCG CGCTGCGGGG CGTGGCCTTC
GCCGCGGTCG GCACCGCCGG CCAGCGCTGC ACCACCATGC GCCGCCTCAT CATCCACGAG
GACATCGCCG AGGAGTTCAC CGAGCGCCTC GTGCAGGCCT ACGGCACGCT GACGATCGGC
GACCCGAGCA CCGGCGAGAG CCTGGTGGGC CCGCTGGTGC ACGGCGGCGC GTACGAGGGC
ATGACCGCCG CCCTCGCGGC CGCCACGGCC GATGGCGGTG AGCTGCTCTG CGGCGGCGAG
CGCGTGCACG CCGAGGAGTA CCCCGAGGCG TACTACGTGC AGCCGGCCAT CGTGCGGATG
CCGGGGCAGA CCGAGATCGT CCGCACCGAG ACCTTCGCGC CGATCCTCTA CGTGATGACC
TACCGCGAGC TCGACGAGGC CATCGCGATG CACAACGACG TGCCGCAGGG CCTGTCCTCG
GCCATCTTCA CCACCGACGT CCGCGAGGCT GAGCGCTTCG TCTCCGACGC GGGCTCCGAC
TGCGGCATCG CCAACGTGAA CATCGGCACC TCCGGCGCCG AGATCGGTGG CGCGTTCGGT
GGCGAGAAGC ACACCGGCGG CGGCCGCGAG TCCGGCTCCG ACGCGTGGCG CGCCTACATG
CGCCGCGCCA CCAACACCGT CAACTACTCG AACGAGCTCC CCCTGGCCCA GGGCGTCGAG
TTCCTCTGA
|
|---|
| Protein sequence | MTHPIHDQVR SALEACGVTV PEGADLHART PITGEQLMGL RATTDAEYET ALTTAGEAFT
AWRDTPAPVR GNLVKRWGEL LTEYKDDLAA LVTAEAGKIP SEAAGEVQEM IDICDLAVGL
SRQLFGRTMP SERPGHRMME TWHPLGPCGI ITAFNFPVAP YAWNTAVALV CGNTIVWKPS
EATMLSALAT DALLGRAAKD VGAPEGLHHV VIGDRTLGEK MSDDERLPLI SATGSTRMGS
EVGPRVAARF GRTVLELGGN NAAIVAPSAD LDLALRGVAF AAVGTAGQRC TTMRRLIIHE
DIAEEFTERL VQAYGTLTIG DPSTGESLVG PLVHGGAYEG MTAALAAATA DGGELLCGGE
RVHAEEYPEA YYVQPAIVRM PGQTEIVRTE TFAPILYVMT YRELDEAIAM HNDVPQGLSS
AIFTTDVREA ERFVSDAGSD CGIANVNIGT SGAEIGGAFG GEKHTGGGRE SGSDAWRAYM
RRATNTVNYS NELPLAQGVE FL
|
|---|
| |