| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04170 |
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| Symbol | |
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| ID | 8371927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 403939 |
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| End bp | 405438 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644990713 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_003148257 |
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| Protein GI | 256824297 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0302673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACC CCACCTGGCA ACTGATCGCC ATCGTCCTGT ACTTCGCCGC CATGGTCGGC
ATCGGCGTCT GGTCCTTCAC CCGCACCGGC GACAAGGGGG ACTACATGCT CGGAGGGCGC
GGCCTGGGCC CGGTGGCCTC CGCCCTGTCC GCCGGCGCCT CCGACATGTC CGGCTGGCTC
CTGATGGGGC TGCCCGGCGC CCTGTACCTC TCGGGCCTGG TCGAGCTCTG GATCGCCATC
GGCCTGACGG CCGGCGCCTG GCTGAACTGG AAGTTCATCG CCCCGCGGCT GCGCACCTAC
ACGGAGGTGG CCGACGACGC CATCACCGTG CCCAGCTTCT TCAGCAACCG CACCGACGAC
CACGCCGGGC TGCTGCGCAT CACCGCCGGT GTCATCATCC TGGTCTTCTT CACCTTCTAC
GTGTCCTCGG GCATGGTCGC CGGAGGGCGC TTCTTCCAGG CCAGCTTCGA CACCAGCTAC
ACCACCGGCA TGCTGGTCGT CTCCGGCATC GTCATCCTCT ACACCCTGAT CGGCGGCTTC
CTCGCGGTGT CCTACACCGA CGTGGTGCAG GGCCTGATGA TGCTGGCAGC CCTGATCCTC
GTGCCGATCG CCGGTGTGGT GCACCTGGGG GGTCTCGGTG ACACGGTGGA CGCGATCCGC
TCGGTCGACG CGCACGCCCT GAGCCTGTTC GGCGGGGGCC TGACCACGAT GGCCTTCATC
TCGGCCGTGG CGTGGGGCCT GGGCTACCCG GGCCAGCCGC ACATCATCAC CCGCTTCATG
GCGCTGCGGT CGCCGCGGCA GGCCCGGTCG GCACGCCGCA TCGGCGTGGG CTGGATGGCG
CTGGCCTGCC TGGGCGCCGC GGCCACCGCG CTGGTGGGCA TCGGCGTCTT CCAGCGCGAG
AGCGAGCAGC TCACGGACCC GGAGACCGTC TTCATCGACC TGGGTGTCCT GCTGTTCCAC
CCGTTCGTCG CCGGCCTGAT GCTGGCCGCC ATCCTCGCGG CGATCATGTC CACCATCTCC
AGCCAGCTCA TCGTCTCAAG CTCGGCGCTG GTGGAGGACA TCTACCTCGG GATCACGGGC
AAGGAGCTGC GCGGCAACAT CGGCGCCCAC CTGGGCCGGG TCGCGGTGCT GGTGATCGCG
CTGGTGGCCG GTGCCCTGTC GCTCAACCCG AGCGACACGA TCCTGGACCT CGTGGCCTTC
GCGTGGGCAG GCTTCGGTGC CTCCTTCGGG CCGATCGTGA TCCTCGCCCT GTACTGGCGG
CGCCTCACCA CCCTGGGCGC GCTAGCCGGC ATGGTCACCG GTGCGGTGGT CTCGTTCGGC
TGGGGCCAGC TCGAGGGTGG GCTGTTCGAC CTCTACGAGA TCGTGCCCGG CTTCGCGCTG
AACCTCCTGG TGACCGTCGT GGTCTCGCTG CTGACCCGGC AGCCCGGCCC GGAGGTGCGG
GCCGAGTTCG ACGAGGCCGT CCGGCGGGCC GAGGCGCAGG AGGAGACCGT TCCGGCCTGA
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| Protein sequence | MSDPTWQLIA IVLYFAAMVG IGVWSFTRTG DKGDYMLGGR GLGPVASALS AGASDMSGWL
LMGLPGALYL SGLVELWIAI GLTAGAWLNW KFIAPRLRTY TEVADDAITV PSFFSNRTDD
HAGLLRITAG VIILVFFTFY VSSGMVAGGR FFQASFDTSY TTGMLVVSGI VILYTLIGGF
LAVSYTDVVQ GLMMLAALIL VPIAGVVHLG GLGDTVDAIR SVDAHALSLF GGGLTTMAFI
SAVAWGLGYP GQPHIITRFM ALRSPRQARS ARRIGVGWMA LACLGAAATA LVGIGVFQRE
SEQLTDPETV FIDLGVLLFH PFVAGLMLAA ILAAIMSTIS SQLIVSSSAL VEDIYLGITG
KELRGNIGAH LGRVAVLVIA LVAGALSLNP SDTILDLVAF AWAGFGASFG PIVILALYWR
RLTTLGALAG MVTGAVVSFG WGQLEGGLFD LYEIVPGFAL NLLVTVVVSL LTRQPGPEVR
AEFDEAVRRA EAQEETVPA
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