Gene Ksed_04140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04140 
Symbol 
ID8371924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp400275 
End bp401597 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content76% 
IMG OID644990710 
ProductDyp-type peroxidase family 
Protein accessionYP_003148254 
Protein GI256824294 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2837] Predicted iron-dependent peroxidase 
TIGRFAM ID[TIGR01412] Tat-translocated enzyme
[TIGR01413] Dyp-type peroxidase family 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0253494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCG TGGACGACGC ACCGCAGGGC CCCGGGGCCA CCAGCCGCCA GCTGTTGGGT 
GGTGCCGCGA TAGCGGCCGG CGGGGGACTG CTCGGCGTCC TCGGGGCCCG GGCCACGGCG
GGTCCGGTCC CGACGGCGGC GGGCGGGGGC ACCGCATCGG GCCCGGGGGC GGGTGCGACG
GGCATCGCGC AGCTGGACGA GCTGGTGGAG CCCGGCCGAC GCTCGGTGCT TCCGGCCGAC
CCGGACGCGC CCTCACCCGA GGCCGGCGCC ACCGAGGTGG GCCGCACCGT CATCGACCCA
CGCGGCCACA CCCAGGCGGG CGTGCTGACC ACGCCGCCGG CGCACGGGCT CTGGGTGGCC
CTCGACCTGG TCGACGGTGG CCGCGAGACC CTGCGCCGGG TGATGCGGCT CTGGACCGAC
TCCATCGACC GCCTGACCTC CGGCCGTGGC ACCCTCACGG ACACCGAGCC GGAGCTGGCG
GCGCTGCCGG CCTCGCTCAC GGTGACCGTC GGGTGGGGGC TGGGTGCCTA CCTCGCGGCC
GGCCTCGATG CGGAGCGTCC GGCCTGGCTC CGCCCGCTGC CCCCGATGTC CTTCGACGAG
CTCGACCCGG CCTGGGGCGA CGGTGAGCTG CTGCTCCAGG TGTGGGCCGA CGACCCGCTG
ACAGTGCGCC ACGCCGCGCG GCAGCTGACC GAGGACGTCC GCGACCTCGC GATGGTCCGC
TGGCGGCAGG CGGGTTACCG TCACGCGGTG GGCACCTCGC GCCCCGGGGC ACCGATGCGG
AACCTCTTCG GCCAGGTGGA CGGCACCGGC AACCCGCCCC CGCTCGACGC CCAGCAGCTG
GTGCACCGCG AGGACGGGTC GGCCGCGATG GTGGTGCGGC GGGTGCGCTT CTCGATGGGG
GGCTGGGAGC AGGCTGCGCG GGCGCAGCGG GAGGCCGCGA TCGGACGGCA GCTACGGTCG
GGAGCGCCGC TGACGGGCCA GCAGGAGTCC GACCCGGTGG ACCTGGGCGC CACCGACGCC
TCGGGGCAGC CGGTTGTCGC CGCGGACGCC CACGTGCGGC GGGCCCAGGA CGGCCACGCC
CGCCACCGCT TCCTGCGCCG GCCGTACAAC TACGACGACG CCCCGGGGGA CGCCGGGCAG
GTGTTCGTGG CCTTCTGCCA GGACGTCGAC GAGCAGTTCC TCCCCATTCT GCGGCGGCTC
AGCGAGTCCG ACGCGATGAA CGAGTGGCTC ACGCACGTGG GCTCGGCGGT GTTCCACGTG
CTGCCGGGGG TGCCCTCGGG GGCGGGGCGG GCCTACCTGG GGTCCCACCT GCTGGAACGG
TGA
 
Protein sequence
MAPVDDAPQG PGATSRQLLG GAAIAAGGGL LGVLGARATA GPVPTAAGGG TASGPGAGAT 
GIAQLDELVE PGRRSVLPAD PDAPSPEAGA TEVGRTVIDP RGHTQAGVLT TPPAHGLWVA
LDLVDGGRET LRRVMRLWTD SIDRLTSGRG TLTDTEPELA ALPASLTVTV GWGLGAYLAA
GLDAERPAWL RPLPPMSFDE LDPAWGDGEL LLQVWADDPL TVRHAARQLT EDVRDLAMVR
WRQAGYRHAV GTSRPGAPMR NLFGQVDGTG NPPPLDAQQL VHREDGSAAM VVRRVRFSMG
GWEQAARAQR EAAIGRQLRS GAPLTGQQES DPVDLGATDA SGQPVVAADA HVRRAQDGHA
RHRFLRRPYN YDDAPGDAGQ VFVAFCQDVD EQFLPILRRL SESDAMNEWL THVGSAVFHV
LPGVPSGAGR AYLGSHLLER