Gene Ksed_04100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04100 
Symbol 
ID8371920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp397196 
End bp398242 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content79% 
IMG OID644990706 
ProductL-aminopeptidase/D-esterase 
Protein accessionYP_003148250 
Protein GI256824290 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3191] L-aminopeptidase/D-esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.037097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCAGC GGACCGACGC ACCACCCGAG GTCCAGGACA CCCCACCCCC TACCCTGCGC 
CCCATGACCT CCCCCGGCAG CATCACCGAT GTCCCCGGCC TGCGGGTCGG CCACGCCCAG
CGCACCGACG ACGGGTGGTG CACCGGCACC ACCGTCGTGC TCCCCCCGCC CGGCACGGTG
GGCGCGGTCG ACGTCCGCGG CGGCGGGCCG GCCACGCACG AGACCGACGC CCTGGCCCCC
GCATCGCTGG TCCCCACGGT CGATGCGGTG GTGCTCACCG GCGGCTCCGC CTTCGGCCTG
GCCTCGGTCA CCGGCGTGCA GCTCTGGTGC GAGGAGGCCG GACGCGGCTT CCCGACACCC
GGTGGACTGG TGCCGATCGT GCCCGGCGCG GCGCTGTACG ACCTAGCTCG GGGTGGCGGG
AACCGGGACG ATGCCGGGCA CCCCACCCGC CCGGACGCGG CGATGGGGCG CGCCGCCGCC
GAGGCTGCGG CAGCCAGCGC AGAGCACGCT GACGTCGCCC GCGGCCGGGT GGGCGCCGGC
ACCGGCGCCC GGGTGATGGG GGCGACCCGG CCCGGCGGGG TGGGCACCGC CTCGGCGCGG
CTCGACGGCG CAGTGGTGGG GGCACTGGCC GTGGTGAACG CCCACGGCAC CCCGCTCGGC
ATCGACCCCG CCGAGCTGTG CGACCCCGTC GAGGCGACCG GCGTGATCGG CAGCGCCCCC
ACCGCGCCCG GCGCCCCGGC CCAGGGCGCG CCCGGGACGG GCACGCCCGG CACGAACACG
ACGCTCGCCG TCGTCGCGAC GGACCTGGCG CTCACCGTGG CCCAGACCGA GGCCCTGTGC
CGCGCGGCAC ACGCCGGAAT GGCCCGCGCC CTGGACCCGG TGCACAGCCT GGTGGACGGT
GACGTGGTGT TCGGGCTGGC CACCGGGGAG CGGCCGCTGC CGGACGACCC GGCGGCCGCC
ACCGGGGTGC TGCTCGCCGC CCAGCAGGCG GCAGCCACGG CCTTGGCTGC CGCGATCGCC
GACGGGGTCT CCCGCCGGCA CGGCTGA
 
Protein sequence
MGQRTDAPPE VQDTPPPTLR PMTSPGSITD VPGLRVGHAQ RTDDGWCTGT TVVLPPPGTV 
GAVDVRGGGP ATHETDALAP ASLVPTVDAV VLTGGSAFGL ASVTGVQLWC EEAGRGFPTP
GGLVPIVPGA ALYDLARGGG NRDDAGHPTR PDAAMGRAAA EAAAASAEHA DVARGRVGAG
TGARVMGATR PGGVGTASAR LDGAVVGALA VVNAHGTPLG IDPAELCDPV EATGVIGSAP
TAPGAPAQGA PGTGTPGTNT TLAVVATDLA LTVAQTEALC RAAHAGMARA LDPVHSLVDG
DVVFGLATGE RPLPDDPAAA TGVLLAAQQA AATALAAAIA DGVSRRHG