Gene Ksed_04080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_04080 
Symbol 
ID8371918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp395056 
End bp396537 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content73% 
IMG OID644990704 
Product(4Fe-4S) cluster-containing protein 
Protein accessionYP_003148248 
Protein GI256824288 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.066804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA TTCCCGGACC GGTCCAGCAG ACCTCGCCCA CCTTCCTGGG TATGCCTCCC 
TTCCCGGAAG CGGCCCGCGA GGCGCTGGGC AAGAGCACGC AGCGGCGCAA CCTGCACCAC
GCCACCCACA CCATCCGCGC CAAGCGGGCC GCCGTGGTCG GTGAGGTCGA CCAGTGGGAG
CAGCTCCGAC TGGCCGGGGA GGCCACCAAG GACGAGGCGC TGCGCCACCT GCCGCACTAT
CTCGAGCAGC TCGAGGAGCG GCTGACCGCC CGTGGGGCCA CCGTGCACTG GGCCCGCGAC
GCTGCCGAGG CGAACCGCAT CGTCATCGAC ATCGCCCGGG CCAAGGGAGC CGAGGAGGTG
GTGAAGGTCA AGTCGATGGC CACCCAGGAG ATCGAGCTGA ACGAGGCCCT GGAGGGCGCG
GGCATCCACG CCTGGGAGAC CGACCTGGCC GAGCTCATCG TGCAACTCGG CGGTGACCTG
CCCAGCCACA TCCTGGTGCC GGCGATCCAC CGCAACCGCA GCGAGGTGCG GGACATCTTC
CGCGCCGAGA TGGGCCGGGT GGGCCGCCCG GCGCCGGCGG ACCTCACCGA CGAACCCGCC
CGCCTGGCCG AGGCGGCCCG GTTGCACCTG CGCGAGAAGT TCCTGCGCGC CAAGGTCGCG
GTCTCCGGGG CCAACTTCGC CGTGGCCGAG ACCGGCAGCC TGGTGGTGGT GGAGTCCGAG
GGCAACGGCC GGATGTGCCT GACCCTGCCC GAGACCCTGG TCTCGGTGGT CGGCATCGAG
AAGGTGCTGC CCCGCTGGGA GGACCTGGAG TCGATGCTGC AGCTGCTGCC GCGTTCGAGC
ACCGGCGAGC GGATGAACCC GTACACCACC GTCTGGAGCG GGGTGCACCC CGGCGACGGG
CCGCAGGAGG TGCACGTGGT GCTGCTGGAC AACGGGCGGT CCCATGCCCT GGCGGACACC
ACCGGCCGGC AGGCGCTGCG CTGCATCCGC TGCTCGGCCT GCCTGAACGT CTGCCCGGTC
TACGAGCGCA CCGGTGGCCA CGCCTACGGC TCGGTCTACC CCGGCCCCAT CGGCGCCGTG
CTCAACCCGC TGCTGCGCGG GGTGTCCTCC GAGGTGGACG CCTCCCTGCC CTACGCCTCC
AGCCTGTGCG GCGCCTGCTT CGACGCCTGC CCGGTGCGCA TCGACATCCC CACCCTGCTG
GTGGAGGGTC GGGAGCGCTC GGTGGAGGCC GGCGGGCACC GGGTCGAGGC GGCGGCGATG
AAGGCGGCCA CCTGGGTGAT GTCCGACCAC CGCCGGTTGG AGGCTGCTCA ACGGGCCGCC
ACCACCGTGG GTCGACTGCG GGGTGACCGC CCGTTCCGGG CGCTGCCCGG CCTCGGCGCG
TGGACCGGGG CGCGGGACCT TCCGGCGCCA CCCGCGGAGA CCTTCCGCCA GTGGTGGGCC
CGTGAGCACG GTGACGACAC GACCGAGAAA GGCGAGCGAT GA
 
Protein sequence
MTTIPGPVQQ TSPTFLGMPP FPEAAREALG KSTQRRNLHH ATHTIRAKRA AVVGEVDQWE 
QLRLAGEATK DEALRHLPHY LEQLEERLTA RGATVHWARD AAEANRIVID IARAKGAEEV
VKVKSMATQE IELNEALEGA GIHAWETDLA ELIVQLGGDL PSHILVPAIH RNRSEVRDIF
RAEMGRVGRP APADLTDEPA RLAEAARLHL REKFLRAKVA VSGANFAVAE TGSLVVVESE
GNGRMCLTLP ETLVSVVGIE KVLPRWEDLE SMLQLLPRSS TGERMNPYTT VWSGVHPGDG
PQEVHVVLLD NGRSHALADT TGRQALRCIR CSACLNVCPV YERTGGHAYG SVYPGPIGAV
LNPLLRGVSS EVDASLPYAS SLCGACFDAC PVRIDIPTLL VEGRERSVEA GGHRVEAAAM
KAATWVMSDH RRLEAAQRAA TTVGRLRGDR PFRALPGLGA WTGARDLPAP PAETFRQWWA
REHGDDTTEK GER