Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_03980 |
Symbol | |
ID | 8371908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 383780 |
End bp | 384766 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644990694 |
Product | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
Protein accession | YP_003148238 |
Protein GI | 256824278 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.831895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.159465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG CCGCCCGCGT GGCCGGGCTC TCGGTCCGCC TGCCCGTCTC CGGGGGGCGG TCCTGGGTGC ACGCGGCCCA CGCCGTGGAC CTGGAGCTCC ACACGGGTCG GGTGCATGCC CTGGTGGGCG AGTCCGGGTG CGGCAAGTCC ATCCTGGCCA GCGTCCTCAT CGGCCTGCTG CCCGCCGGCA CGCAGGTGGC CGGCGCCCTC GAGATCGCCG GCCACACCCT CGACCCCACG GACGAGGCCC CCTGGCAGCA CCTGCGCGGC CACCACGTCG GCCTGGTGCC GCAGTCCGCG GCCACGCTGC TGACGCCGAC CCGACGGGTG GGGCCGCAGG TGGCCGAGAC GCTGCGCGCG CTCTCCCCCG AGGCCCACGG GCTGCGGGGC CGGTCGCTCG ATGCGCTGGT GGCCCGCCAC CTGAAGCGGG TGGGGCTCAC GGCCCGGGTG GCGCGGTTGT ACCCGCACCA GCTCTCCGGC GGCATGGCCG CCCGGGTGGC CTACGTGCTG GCCACGGCCG GCCGCCCGGC GGTGCTGCTG GCCGACGAGC CCACCGCCAG CCTGGACGCC GAGAGCCGCG AGGCCGTGCT CGACCTGCTG CGGTCGGCCG CGGACGGCGG CGCCGCCGTG CTGCTGATCA CCCACGACCT CGCGTCGCTC GGCGCCCGGA CCGGACGGGT GGACGAGGTC TCGGTGATGT ACGCCGGGCA GGTGGTCGAC CACGGCCCGG CCGAGAGGCT GCTGGCCCCG CCCGGTCCCC CGCAGGCGCC GGACGACACC ACGGGCCCGG ACCCGGTGGC GCGCCACGCC TACACCCGCG CCCTGGTGTC CGCCCTGCCC CGGTACGGAC TGCACCCCCT CGGGGGCGCG CCGCCCTCCC TGCTCGATGC GGTGACTCCC CCCTCCGTCG ACGACCGCCT CGCAGCGGGC ATGGGCCCGC ACCCCGGCAC CACCGGCACG ACGGACCGCC CAGGAGGTGC CCGATGA
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Protein sequence | MSAAARVAGL SVRLPVSGGR SWVHAAHAVD LELHTGRVHA LVGESGCGKS ILASVLIGLL PAGTQVAGAL EIAGHTLDPT DEAPWQHLRG HHVGLVPQSA ATLLTPTRRV GPQVAETLRA LSPEAHGLRG RSLDALVARH LKRVGLTARV ARLYPHQLSG GMAARVAYVL ATAGRPAVLL ADEPTASLDA ESREAVLDLL RSAADGGAAV LLITHDLASL GARTGRVDEV SVMYAGQVVD HGPAERLLAP PGPPQAPDDT TGPDPVARHA YTRALVSALP RYGLHPLGGA PPSLLDAVTP PSVDDRLAAG MGPHPGTTGT TDRPGGAR
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