Gene Ksed_03980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03980 
Symbol 
ID8371908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp383780 
End bp384766 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content78% 
IMG OID644990694 
ProductABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
Protein accessionYP_003148238 
Protein GI256824278 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.831895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.159465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCGCCCGCGT GGCCGGGCTC TCGGTCCGCC TGCCCGTCTC CGGGGGGCGG 
TCCTGGGTGC ACGCGGCCCA CGCCGTGGAC CTGGAGCTCC ACACGGGTCG GGTGCATGCC
CTGGTGGGCG AGTCCGGGTG CGGCAAGTCC ATCCTGGCCA GCGTCCTCAT CGGCCTGCTG
CCCGCCGGCA CGCAGGTGGC CGGCGCCCTC GAGATCGCCG GCCACACCCT CGACCCCACG
GACGAGGCCC CCTGGCAGCA CCTGCGCGGC CACCACGTCG GCCTGGTGCC GCAGTCCGCG
GCCACGCTGC TGACGCCGAC CCGACGGGTG GGGCCGCAGG TGGCCGAGAC GCTGCGCGCG
CTCTCCCCCG AGGCCCACGG GCTGCGGGGC CGGTCGCTCG ATGCGCTGGT GGCCCGCCAC
CTGAAGCGGG TGGGGCTCAC GGCCCGGGTG GCGCGGTTGT ACCCGCACCA GCTCTCCGGC
GGCATGGCCG CCCGGGTGGC CTACGTGCTG GCCACGGCCG GCCGCCCGGC GGTGCTGCTG
GCCGACGAGC CCACCGCCAG CCTGGACGCC GAGAGCCGCG AGGCCGTGCT CGACCTGCTG
CGGTCGGCCG CGGACGGCGG CGCCGCCGTG CTGCTGATCA CCCACGACCT CGCGTCGCTC
GGCGCCCGGA CCGGACGGGT GGACGAGGTC TCGGTGATGT ACGCCGGGCA GGTGGTCGAC
CACGGCCCGG CCGAGAGGCT GCTGGCCCCG CCCGGTCCCC CGCAGGCGCC GGACGACACC
ACGGGCCCGG ACCCGGTGGC GCGCCACGCC TACACCCGCG CCCTGGTGTC CGCCCTGCCC
CGGTACGGAC TGCACCCCCT CGGGGGCGCG CCGCCCTCCC TGCTCGATGC GGTGACTCCC
CCCTCCGTCG ACGACCGCCT CGCAGCGGGC ATGGGCCCGC ACCCCGGCAC CACCGGCACG
ACGGACCGCC CAGGAGGTGC CCGATGA
 
Protein sequence
MSAAARVAGL SVRLPVSGGR SWVHAAHAVD LELHTGRVHA LVGESGCGKS ILASVLIGLL 
PAGTQVAGAL EIAGHTLDPT DEAPWQHLRG HHVGLVPQSA ATLLTPTRRV GPQVAETLRA
LSPEAHGLRG RSLDALVARH LKRVGLTARV ARLYPHQLSG GMAARVAYVL ATAGRPAVLL
ADEPTASLDA ESREAVLDLL RSAADGGAAV LLITHDLASL GARTGRVDEV SVMYAGQVVD
HGPAERLLAP PGPPQAPDDT TGPDPVARHA YTRALVSALP RYGLHPLGGA PPSLLDAVTP
PSVDDRLAAG MGPHPGTTGT TDRPGGAR