Gene Ksed_03410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03410 
Symbol 
ID8371851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp326807 
End bp328693 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content74% 
IMG OID644990637 
ProductATPase component of ABC transporters with duplicated ATPase domain 
Protein accessionYP_003148183 
Protein GI256824223 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCCC CCTCCCCGCG CGCCAACCTC GTCAACGCAG AGTCCCTCCA CCTGGTGGTG 
GGCACCCAGG TGCTCCTCGA TGACGTGTCG CTCGGCCTGA ACGACGGCGA CCGCATCGGC
GTGGTCGGCC GCAACGGCGG GGGCAAGTCC AGCCTGCTGC GTGCCCTCTC GGGGGAGCTC
GCGGTCGACT CCGGCCGGGT CGTGCGCTCG CGGGGGGCCA CCATCGGCCG CCTCCGCCAG
CAGGACGACT TCGCCGCGGG GGCCACGGTC CGTGACGTCG TGCTGCCGGG TCTGGAGGAG
CACGAGTGGG CGGCCGACGC CCGCATCCGC GGCATCCTCA ACGGCCTGCT CGGCGGGCTC
GATGCCGAGG GCCTGGGCGG TCTGGGCGCC CCGGTGGCCG GCATGTCCGG CGGGGAACGC
CGGCGCATGG CGCTGGCCGC GCTCCTGGTG GCCGACCCGG ACGTGCTCCT GCTGGACGAG
CCCACCAACC ACCTCGACGT CGAGGGCGTG GCGTGGCTGG CCGAGCACCT GCAGGGGCGC
CGTCGGCCCG GCTCCGCGCT GGTCGTCGTC ACCCACGACC GTTGGTTCCT CGATGCGGTG
GTGGAGCAGA CCTGGGAGGT CGTCGAGGGG CAGGTCCACC AGTACGAGGG GGGTTACGCC
GCGTTCGTGC AGGCCCGGGC GGAGCGGGCG CGGGTGGAGC GGGCCACCGA GGAGCGCCGC
CAGAACATCC TGCGCAAGGA GCTCGCGTGG CTGCGGCGCG GCGCCCCGGC CCGCACCAGC
AAGCCGAAGT TCCGCATCGA GGCCGCCGAC GCCCTCATTG CCGGGGAGCC CGAGCCCCGC
GACGACGTGC AGCTGGCGCG CTTCGCGACC ACCCGGCTGG GCAAGGACGT CTACGACCTC
GTGAACGCCA CCGTCGCCGT GGGGGAGGGC GAGGAGCGCA CCACCCTCCT CGATGGGGTG
ACCTGGCGCC TCGGCCCGGG CGACCGCTAC GGCATCGTCG GGGTGAACGG CGCGGGCAAG
TCCACCCTGC TGCGCGTGCT GCTGGAGCAG GTGCCGCTGG CCGGCGGCAA GCTGAAGGTC
GGGCGCACGG TGCAGCCGGC GATCCTGAGC CAGGACCTGC GGGAGCTCGA CGAGGTGGCG
GGCATGACCG TCATCGACGC CATCACGAAC GTGCGGTCGT TCACCGTGTT GGACGGCAAG
GAGGTCTCCG CGAGCTCGCT GGCCAAGCGG CTGGGCTTCT CCGGCCCGCG GCAGCAGAGC
CGGGTCTCCG ACCTTTCCGG CGGTGAGCGG CGTCGGCTGC AGTTCGTGCG CCTGCTGCTG
GACGAGCCGA ACGTGCTGAT GCTGGACGAG CCCACCAACG ACCTCGACAT CGAGACCCTC
ACCTCCATGG AGGACGTGCT CGACGGCTGG GCCGGCACGC TGCTGGTGGT GAGCCACGAC
CGCTACCTGC TGGAGCGCAT GGCCAACCGA CAGGTCGCGT TGTTGGGCGA TGGCCGCATC
CGCGACCTGC CGGGCGGGGT GGAGCAGTAC CTCGAGCTGC GGCGGGAGCG GCGGGCGGCC
GGGGTGGGCA CCGGCCGCGG GGGTCGGGAC CTGGCCGGTG CGGGCGCCGG CGCTGCCGGG
GGCTCGGGCG ACGCGGGCGG CGGGACGGGC GCTCCCGCAT CGGGGCTGAG CCCTGCGCAG
GAGCGGCAGC TGACCAAGGC CATGGCCCGC GCCGAGAAGC AGATCGAGAA GCTGACGCAG
CAGGCCGAGC GGGTGCACGC CCAGATGGCC GAGGCCGCCA CGGATCCCGA CCGGCTGGCC
GAGCTCACGG CGCAGGAGCG GGACCTGCGG GCGCAGCACG ACGCCGCCGA GGCCGAGTGG
TTGGAGGCGG CCGAGCAGCT GGAGTGA
 
Protein sequence
MNPPSPRANL VNAESLHLVV GTQVLLDDVS LGLNDGDRIG VVGRNGGGKS SLLRALSGEL 
AVDSGRVVRS RGATIGRLRQ QDDFAAGATV RDVVLPGLEE HEWAADARIR GILNGLLGGL
DAEGLGGLGA PVAGMSGGER RRMALAALLV ADPDVLLLDE PTNHLDVEGV AWLAEHLQGR
RRPGSALVVV THDRWFLDAV VEQTWEVVEG QVHQYEGGYA AFVQARAERA RVERATEERR
QNILRKELAW LRRGAPARTS KPKFRIEAAD ALIAGEPEPR DDVQLARFAT TRLGKDVYDL
VNATVAVGEG EERTTLLDGV TWRLGPGDRY GIVGVNGAGK STLLRVLLEQ VPLAGGKLKV
GRTVQPAILS QDLRELDEVA GMTVIDAITN VRSFTVLDGK EVSASSLAKR LGFSGPRQQS
RVSDLSGGER RRLQFVRLLL DEPNVLMLDE PTNDLDIETL TSMEDVLDGW AGTLLVVSHD
RYLLERMANR QVALLGDGRI RDLPGGVEQY LELRRERRAA GVGTGRGGRD LAGAGAGAAG
GSGDAGGGTG APASGLSPAQ ERQLTKAMAR AEKQIEKLTQ QAERVHAQMA EAATDPDRLA
ELTAQERDLR AQHDAAEAEW LEAAEQLE