| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_03400 |
|---|
| Symbol | |
|---|
| ID | 8371850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 325803 |
|---|
| End bp | 326780 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644990636 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_003148182 |
|---|
| Protein GI | 256824222 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC AGCCGGCCCC CCGCATCGCC ACCGTCCGCG TTCCCGCGAA GGTGAACCTC
GCGCTGCGGG TGGGCGCCCC GGACCCGGGG AGCGGCTACC ACCCGCTGGC CACCGTCTTC
CACGCCGTCG ACCTGACCGA TGAGGTGACC GTCCGGCGCG CGCGCCGCTT CTCCCTGGAG
GTGACCGGCC GGTTCACCGA GGGGGTGCCG GCCGACGAGA CGAACCTCGC CTGGCAGGCC
GTGGTGCTCC TGCGCCACCA CTACCGCCAG ACCTGTGGGG TGCGGACCCC GCTGCCGGTG
GCGATCACCC TCGAGAAGAA CATCCCGGTG GCCGGGGGCA TGGCCGGGGG TTCCGCGGAC
GCCGCGGGGG CCCTCTTGGC TGCGAACGAG GTGTGGGGCA ACGAGCTGAC CATCGAGGAC
CTGCGCGACA TCGCTGCCGA GCTGGGCGCC GACGTCCCCT TCGCCCTGCT GGGCGGCAAC
GCCCTGGGCC TGGGGCGCGG CGACGAGCTG TCCACGGTGC TCGCGCGGGG CCAGCTCCAC
TGGGTGTTCT GCGTGAGCCC CGAGGGCCTG AGCACGCCGG AGGTCTACCG CGCGTTCGAC
CGCCTCGCCG GGTGGGACCA GGGACCGACG ATGGACACGA TCGAGGCGTG GGAGACCCCG
CCCGAGCCGC CGGAGGACCT GCTCCAGGCC CTGCGCTCCG GGGACGCCGT CGAGGTGGGG
CAGCACCTGG AGAACGACCT GCAGGAGGCC GCCGTCGAGC TGCAGCCCGG CCTGCGCGAG
ACCCTGGCGG CCGGTGCCGA TGTGGGGGCC CTGACCGGCA TCGTCTCGGG CTCCGGGCCC
ACCATCGCGC TGTTGGCCTC CAGCCACGAC CACGCGCTGG ACATCTCGGT GGGCATGGCC
GCCCTGCGCC CGGAGGTCGA GGTCTTCGTC GCCTCGGGTC CGGCGCCCGG CGCGCGCGTG
GTCTCCACCC GCTCCTGA
|
|---|
| Protein sequence | MTAQPAPRIA TVRVPAKVNL ALRVGAPDPG SGYHPLATVF HAVDLTDEVT VRRARRFSLE
VTGRFTEGVP ADETNLAWQA VVLLRHHYRQ TCGVRTPLPV AITLEKNIPV AGGMAGGSAD
AAGALLAANE VWGNELTIED LRDIAAELGA DVPFALLGGN ALGLGRGDEL STVLARGQLH
WVFCVSPEGL STPEVYRAFD RLAGWDQGPT MDTIEAWETP PEPPEDLLQA LRSGDAVEVG
QHLENDLQEA AVELQPGLRE TLAAGADVGA LTGIVSGSGP TIALLASSHD HALDISVGMA
ALRPEVEVFV ASGPAPGARV VSTRS
|
|---|
| |