Gene Ksed_03390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03390 
Symbol 
ID8371849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp324870 
End bp325778 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content75% 
IMG OID644990635 
Productdimethyladenosine transferase 
Protein accessionYP_003148181 
Protein GI256824221 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCG TGACCCCCGA CCAGGACCCC GCTCCCCGCG CGACCGAGGC ACCCGATGCG 
GGCTTGCTCG GCCCCGCCCG AGTCCGGGAG CTCGCCGACC GCCTGGGGGT CAGCCCCACC
AAGCAGTGGG GGCAGAACTT CGTCATCGAC AAGGGGACCG TGCGCCGCAT CGTGCGGGCC
TCCGGGGTCG GGCCCGGCGA CCACGTGGTC GAGGTGGGCC CGGGTCTGGG CTCGCTGACG
CTGGCGCTGC TGCCCGTGGT GGACTCGCTC ACCGCCGTGG AGGTGGACCC GCGGCTGGCC
GAGGCGCTGC CCGACACCGT CGCGGCCCTC GCCCCGGAGC GCGCCACCGA CCTGCGCGTG
GTGCACGCCG ACGCGCTGCG TGTGACCGAG CTGCCCGGCC CGGCGCCCAC CGCGCTGGTG
GCCAACCTGC CGTACAACAT CGCCGTGCCG GTGGTGCTGA CCTTCCTGGA GCGCTTTCCC
TCCCTGCGCA CCGTGCTGGT GATGGTGCAG CTCGAGGTGG CCGAGCGCAT GTCCGCGGCG
CCGGGCTCCA AGATCTACGG GGCCCCGAGC CCCAAGTGCG CCTGGTACGG CCCCACCCGG
TTGGCCGGTC GCATCGGCCG CAACGTGTTC TGGCCGGCGC CCAACGTGGA CTCGGGGCTG
GTCCGCATCG ACGTGCAGCC GCGCGAGGAC GCGGGTGTCT CGCGCCAGGA GGTCTTCGCC
TGCATCGACG CCGCATTCGC CCAACGGCGC AAGACGCTGC GCGCCGCGCT CGCCGAGTGG
GCGGGCTCGG CCCAGCAGGC CGAGGAGGCC CTGGTGGCCG CCGGGATCGA CCCGCGCACC
CGCGGCGAGG TGCTGGACGT GCACGGCTTC ATCGCGCTCG CCGCCGCCCG CAACCGGCTG
AGGGAGTGA
 
Protein sequence
MAPVTPDQDP APRATEAPDA GLLGPARVRE LADRLGVSPT KQWGQNFVID KGTVRRIVRA 
SGVGPGDHVV EVGPGLGSLT LALLPVVDSL TAVEVDPRLA EALPDTVAAL APERATDLRV
VHADALRVTE LPGPAPTALV ANLPYNIAVP VVLTFLERFP SLRTVLVMVQ LEVAERMSAA
PGSKIYGAPS PKCAWYGPTR LAGRIGRNVF WPAPNVDSGL VRIDVQPRED AGVSRQEVFA
CIDAAFAQRR KTLRAALAEW AGSAQQAEEA LVAAGIDPRT RGEVLDVHGF IALAAARNRL
RE