| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_03360 |
|---|
| Symbol | |
|---|
| ID | 8371846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 322316 |
|---|
| End bp | 324058 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644990632 |
|---|
| Product | cell wall-associated hydrolase, invasion-associated protein |
|---|
| Protein accession | YP_003148178 |
|---|
| Protein GI | 256824218 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG TCAGCGTGAT CATCCCCGTG CTCGACGACG CCCCGGCCCT CGACGTCTGC
CTGGGCCACC TCATGCGCCA GCGGGTGCTC CCCGACGAGG TGGTCGTGGT CGACAACGGC
GAGCAGCCCA CCGCCGGCCT CGTCCGCCGG TCCGACCTGC CCTTCCCGGT GCGCGTCGTC
CACGAGCCCC GGCGGGGCAC CGCATCGGCC ACCGCAGCCG GCTTCGACGC GGCCCACGGG
GACCTGCTGG CCCGCTGTGA CGCCGACTGC CGACCCGACG ACGGGTGGGT GGGCGCCCTC
GCGGCCGCCT TCGCCGCCGA CCGGGGCCTC GATGCGGTGA CTGGCCACAT CGCCTTCCAC
GACCTGTCCG GGTGGTCCGG CACCCTGGGC ACGCTCTTCT ACCGCACCGG CATGGGACTG
GGCATGCACC TGGCCCTGGC CCGCCCACCC CTGTGGGGCT CGAACCTCGC CCTGCGGGCC
ACGGCCTGGC AGCGCTGCCG CGATGCCGTG CACCCGGACG ACCCGCTGGT GCACGACGAC
CTGGACCTCT CCTTCGCGCT GGGCCCCCTG GCCCGCGTGC GGCGGGTGCG CGACCTGCGC
GTGACGGCCG AGGCACGGAT CTTCGACAGC CCCCGCCACC TCGTGACACG GGTGCGGCGG
GCACTGCGCA CCTGCCGCCT CGGGTGGCGC CGTCAGCCCC CGGGTCACCG GTGGGTGAAC
CGGCTGACCG GCGGGCGCTA CCTGTGGGCC AAGGAGCCCC GGGAGGAGCT GCGCGCCGGC
GACGTCGCCT TCGTGGACGT GACCGTGGCG ACCCTCTGGG TGGAGCCGGG CACCGACCGG
CCGCTGGACG CCCCGGCCGT GGGCGCGCCG GTGGACCCCG AGGCCTGGAA CCGGGTGCTC
GACGACGACG CCCGCGAGTG GATGGTGGGC CAGGTGGAGA CCCAGGCCCA GCTCGGCGCC
CGGGTGACGG TCACCGAGCG GCGGGGCGAC TGGGCCCACG TGGTGGTGCA CGACCAGCCG
ACCCCGCGTG ACCCCCGCGG CTACCCGGGG TGGGTGCCGG TCGCGCAGGT TCGCACGAAC
CCGACCTTCG ACCGCCAGCT CGCGGAACGG GAGCTCGCGG TGGTCACCGC CGACAGCACC
CTGCTGTCGG CCACCTCCTC GGGGGGGCGT CCGCGCCTCG CCGTGGGCGT CACCACGACC
CTCCCGGTGC TCTCCGCGAG GGCGGGCGCG GTCGAGCTCG CCCTGCCGGA CGGCTCCGCC
GCCTGGGCCG ATGCGGGGGA CGTCGCCCGG GTGCCGCGCC CCAGCCACGC GCCGGCGCCC
GCTGCGGACC CGGCGCCCAC CGGCGAGCAG CTGGTGGCCA CCGCCGAGCG CTTCCTCGGG
CTGCGCTACC TGTGGGCCGG GGTGTCCCCG TGGGGGCTGG ACTGTTCCGG CTTCGCGCTG
CTGGCCCACC GCATCCACGG CATCGAGATC CCCCGCGATG CGGATGCGCA GGCCGAGGCG
GGCGAGGCCG TGGAGGCCGA GGACCTGCGG CCCGGGGACC TGCTCTTCTT CGCCGAGCCC
GGCGGGGTGG GTTTCGTGCA CCACGTGGGC ATGTACCACG GTCAGGGGCG GATGATCCAC
GCGCCGAACC CGCGCAGCGC CGTGTGCGTC GTGGACTGGC GGGCTTGGGA CGCGAACCGC
GAGTTCTCCG GGGCCCGGCG CTACCTCAGC GAGCGCAGTG CTGGGGCACC AGCGCCCGGG
TGA
|
|---|
| Protein sequence | MSTVSVIIPV LDDAPALDVC LGHLMRQRVL PDEVVVVDNG EQPTAGLVRR SDLPFPVRVV
HEPRRGTASA TAAGFDAAHG DLLARCDADC RPDDGWVGAL AAAFAADRGL DAVTGHIAFH
DLSGWSGTLG TLFYRTGMGL GMHLALARPP LWGSNLALRA TAWQRCRDAV HPDDPLVHDD
LDLSFALGPL ARVRRVRDLR VTAEARIFDS PRHLVTRVRR ALRTCRLGWR RQPPGHRWVN
RLTGGRYLWA KEPREELRAG DVAFVDVTVA TLWVEPGTDR PLDAPAVGAP VDPEAWNRVL
DDDAREWMVG QVETQAQLGA RVTVTERRGD WAHVVVHDQP TPRDPRGYPG WVPVAQVRTN
PTFDRQLAER ELAVVTADST LLSATSSGGR PRLAVGVTTT LPVLSARAGA VELALPDGSA
AWADAGDVAR VPRPSHAPAP AADPAPTGEQ LVATAERFLG LRYLWAGVSP WGLDCSGFAL
LAHRIHGIEI PRDADAQAEA GEAVEAEDLR PGDLLFFAEP GGVGFVHHVG MYHGQGRMIH
APNPRSAVCV VDWRAWDANR EFSGARRYLS ERSAGAPAPG
|
|---|
| |