Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_03330 |
Symbol | |
ID | 8371843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 320565 |
End bp | 321428 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644990629 |
Product | hydrolase, TatD family |
Protein accession | YP_003148175 |
Protein GI | 256824215 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.849452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCGC ACTCCAGCCC GCGCCGCGCC GAGCGCCCGC CGGCCCCCGA GCCGCTGCCG GTGCCCGTGG TGGACAACCA CACCCACATC GACATCGAGC GCGACGGGGT GGCGATGGGT GCCGACGACG GCGTGCACGG GGTCATCGCC CAGGCCCGCG TCGTGGGGGT CGACCGGTTG GTGCAGATCG GGTGCGATCT CGAGTCGGCG CGGCACACTG CATCGGTCGT GGACCGGCAC CCCGAGGTGC TGGGCGGGGT GGCCCTGCAC CCGAACGAGG TGCCGGTCCT GGCGGCGGCC GGTGAGCTCG ACGCGGCGTT GGAGGAGATC GACCGGCTGG CTCGCGGTGA GCGCATCCGC GTGGTGGGGG AGACGGGGCT CGACTACTTC CGCACCCCGC CGGAGGGGCG GGGTGCGCAG GTCGAGGCCT TCCGCTGGCA CATCGCGAAG GCCAAGGAGC TGGGCAGGGC GCTGCAGATC CACGACCGGG ACGCCCACGA GGACGTGCTG CGGGTCCTCG CCGAGGAGGG GGCACCGGAG AAGACGGTGA TGCACTGCTT CAGCGGCGAC ATCGGCATGG CCCGGGAGTG CGTGGAGCGC GGATACCTGC TCAGCTTCGC CGGCACGGTG ACCTTCAAGA ACGCGCGCGA CCTGCGCGAC GCGCTCTCGG TGGTGCCGCT GGACCAGGTG CTGGTGGAGA CCGACGCCCC CTACCTGACT CCCCACCCGC ACCGCGGGGC ACCGAACGCG CCCTACTTGG TGCCTCTCAC GGTGCGGGTG ATGGCGACCA CGCTGAACGT CTCGGTGCCG GAGCTGTGCG CGGCGATCTC CGAGAACTCC GAGCGGGTCT ACGGGCCCTG GTGA
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Protein sequence | MSPHSSPRRA ERPPAPEPLP VPVVDNHTHI DIERDGVAMG ADDGVHGVIA QARVVGVDRL VQIGCDLESA RHTASVVDRH PEVLGGVALH PNEVPVLAAA GELDAALEEI DRLARGERIR VVGETGLDYF RTPPEGRGAQ VEAFRWHIAK AKELGRALQI HDRDAHEDVL RVLAEEGAPE KTVMHCFSGD IGMARECVER GYLLSFAGTV TFKNARDLRD ALSVVPLDQV LVETDAPYLT PHPHRGAPNA PYLVPLTVRV MATTLNVSVP ELCAAISENS ERVYGPW
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