Gene Ksed_03330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03330 
Symbol 
ID8371843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp320565 
End bp321428 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID644990629 
Producthydrolase, TatD family 
Protein accessionYP_003148175 
Protein GI256824215 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.849452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGC ACTCCAGCCC GCGCCGCGCC GAGCGCCCGC CGGCCCCCGA GCCGCTGCCG 
GTGCCCGTGG TGGACAACCA CACCCACATC GACATCGAGC GCGACGGGGT GGCGATGGGT
GCCGACGACG GCGTGCACGG GGTCATCGCC CAGGCCCGCG TCGTGGGGGT CGACCGGTTG
GTGCAGATCG GGTGCGATCT CGAGTCGGCG CGGCACACTG CATCGGTCGT GGACCGGCAC
CCCGAGGTGC TGGGCGGGGT GGCCCTGCAC CCGAACGAGG TGCCGGTCCT GGCGGCGGCC
GGTGAGCTCG ACGCGGCGTT GGAGGAGATC GACCGGCTGG CTCGCGGTGA GCGCATCCGC
GTGGTGGGGG AGACGGGGCT CGACTACTTC CGCACCCCGC CGGAGGGGCG GGGTGCGCAG
GTCGAGGCCT TCCGCTGGCA CATCGCGAAG GCCAAGGAGC TGGGCAGGGC GCTGCAGATC
CACGACCGGG ACGCCCACGA GGACGTGCTG CGGGTCCTCG CCGAGGAGGG GGCACCGGAG
AAGACGGTGA TGCACTGCTT CAGCGGCGAC ATCGGCATGG CCCGGGAGTG CGTGGAGCGC
GGATACCTGC TCAGCTTCGC CGGCACGGTG ACCTTCAAGA ACGCGCGCGA CCTGCGCGAC
GCGCTCTCGG TGGTGCCGCT GGACCAGGTG CTGGTGGAGA CCGACGCCCC CTACCTGACT
CCCCACCCGC ACCGCGGGGC ACCGAACGCG CCCTACTTGG TGCCTCTCAC GGTGCGGGTG
ATGGCGACCA CGCTGAACGT CTCGGTGCCG GAGCTGTGCG CGGCGATCTC CGAGAACTCC
GAGCGGGTCT ACGGGCCCTG GTGA
 
Protein sequence
MSPHSSPRRA ERPPAPEPLP VPVVDNHTHI DIERDGVAMG ADDGVHGVIA QARVVGVDRL 
VQIGCDLESA RHTASVVDRH PEVLGGVALH PNEVPVLAAA GELDAALEEI DRLARGERIR
VVGETGLDYF RTPPEGRGAQ VEAFRWHIAK AKELGRALQI HDRDAHEDVL RVLAEEGAPE
KTVMHCFSGD IGMARECVER GYLLSFAGTV TFKNARDLRD ALSVVPLDQV LVETDAPYLT
PHPHRGAPNA PYLVPLTVRV MATTLNVSVP ELCAAISENS ERVYGPW