Gene Ksed_03190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03190 
Symbol 
ID8371829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp305750 
End bp307432 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content70% 
IMG OID644990615 
Productalkyl hydroperoxide reductase, F subunit 
Protein accessionYP_003148161 
Protein GI256824201 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR03140] alkyl hydroperoxide reductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACC AGAACCTCGC CACCCAACTC CGTCAGCTCC TGGGCAACCT GAAGCGCCCC 
ATCGAGCTGC TCACCACCGT CGAGGCCGAT GCCACCGACG CCACCTCGCG CGAGACGCTG
GAGCTGTGCG CCGAGATCGC CGAGATGTCC GAGCTCGTCA CCACCCGCGA GGCCGAGGGT
GAGGAGCGCG CCGACCGGGC GCCTTCCTTC CGCATCCAGG CCGCGGCCGA CACCTCCTCC
GCGGTGACCT TCGCCGGTCT GCCGATGGGG CACGAGTTCA CCTCCCTGGT GCTGGCGCTG
CTGAACATCG GTGGCCACCC CAGCAAGGCC GCCGCCGAGA CGATCGAGCA GATCCGCGGC
ATCGAGGGCA CCCACCGCTT CGAGACCTTC TTCAGCCAGT CCTGCCAGAA CTGCCCCGAC
GTGGTGCAGG CGCTGGACCT CATGGCGACG CTGAACCCGA ACATCACGCA CGTCGCCATC
GACGGCTCGG CCTTCCCCGA GGAGGCGGAC GAGCGCGGCG TGATGGCCGT GCCCACCGTC
TTCCTGGACG GCGAGGACTT CGGCTCCGGG CGCATGACCC TGGAGGAGAT CGTCGAGCGC
ATCGACACCG GCGCCGCCGA GGCCGCCGCG GACCGGCTGG CCGACGCCGA CCCCTACGAG
GTGCTGGTCC TGGGTGGTGG CCCCGCCGGC TCCACCGCCG CGATCTACGC CGCGCGCAAG
GGCATCCGCA CCGGCTTGGT GGCCGAGCGC ATGGGTGGCC AGGTCAACGA CACCATGAGC
ATCGAGAACG TCTCCGGCAC CTCGCACACC GAGGGCCCGA AGCTGGCCGC CGACCTCGAG
CGCCACGTGA ATGACTACGA GGTCGAGCTG GTGAAGTCCC AGGAGGCCGT GGGCGTGACC
CCGGCCGAGG CCGAGGGTGG CTACCACTCC GTCGAGCTCG CCTCCGGTGC CACGCTGCGC
TCCCGCTCGC TGGTGATCGC CACCGGTGCC TCCTGGCGCA CCATGGGCGT CCCCGGCGAG
GACGAGTACC GCAACAAGGG CGTCACCTTC TGCCCGCACT GCGACGGCCC GCTGTTCAAG
GGCAAGCGCG TCGCCGTCAT CGGCGGTGGC AACTCCGGTG TGGAGGCCGC CATCGACCTG
GCCGGGATCG TCGGCCACGT GACGGTGCTG GAGTTCATGG ACTCCATGCG CGCCGACCAG
GTGCTCCAGG ACAAGCTGCG CAGCCTGCCG AACGTGGACA TCGTGCTGGG CGCCGCGACG
AAGGAGGTCG TCGGCGACGG CTCCCGCGTG ACCGGGCTGA AGTATGAGGA GCGCGCCACG
GGCGAGAGCC ACCAGCTGGA GCTCGAGGGC GTGTTCGTGC AGATCGGTCT GGTGCCCAAC
TCCGCCTTCC TGAAGGAGTC CGGCGTCGAG CTCACCGACC GCGGCGAGGT CGTCATCGAC
GGCCGGGGTG CCACGAACGT CCCGGGCATC TTCGCCGCCG GCGACGTCTC GACCGTGCCG
TACAAGCAGA TCGTGGTGGC CTTCGGGTCC GGTTCCACGG CTTCACTGAG CGCCTTCGAC
CACCTCATTC GCACCTCCGC CCCGGCGGAC GAGCCGGCCT CTGAGACCGC TGCGGCCACC
AAGGTCGTGG ACAGCGAGAA CGAGCCGACG GACGTGGCCG ACCTGGCGGA CGCGAACTCG
TGA
 
Protein sequence
MLDQNLATQL RQLLGNLKRP IELLTTVEAD ATDATSRETL ELCAEIAEMS ELVTTREAEG 
EERADRAPSF RIQAAADTSS AVTFAGLPMG HEFTSLVLAL LNIGGHPSKA AAETIEQIRG
IEGTHRFETF FSQSCQNCPD VVQALDLMAT LNPNITHVAI DGSAFPEEAD ERGVMAVPTV
FLDGEDFGSG RMTLEEIVER IDTGAAEAAA DRLADADPYE VLVLGGGPAG STAAIYAARK
GIRTGLVAER MGGQVNDTMS IENVSGTSHT EGPKLAADLE RHVNDYEVEL VKSQEAVGVT
PAEAEGGYHS VELASGATLR SRSLVIATGA SWRTMGVPGE DEYRNKGVTF CPHCDGPLFK
GKRVAVIGGG NSGVEAAIDL AGIVGHVTVL EFMDSMRADQ VLQDKLRSLP NVDIVLGAAT
KEVVGDGSRV TGLKYEERAT GESHQLELEG VFVQIGLVPN SAFLKESGVE LTDRGEVVID
GRGATNVPGI FAAGDVSTVP YKQIVVAFGS GSTASLSAFD HLIRTSAPAD EPASETAAAT
KVVDSENEPT DVADLADANS