Gene Ksed_03070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03070 
Symbol 
ID8371817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp295635 
End bp297356 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content69% 
IMG OID644990603 
Productcarbon starvation protein, predicted membrane protein 
Protein accessionYP_003148149 
Protein GI256824189 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGC TCGTCCTCGT CCTGGTCGGG ATCGCCATGA TCCTGGCCGG GTACCTCCTC 
TACTCCCGGT GGCTGGCCAC CCGGGTGTAC ACGCTCGATG CGGGGTTCCG CACCCCCTCC
CACGCCCTGC GCGACGACGT GGACTTCGTG CCCACGAACA AGTACGTGCT GTGGGGCCAC
CATTTCACCT CTGTGGCCGG TGCGGCTCCC ATCGTGGGCC CGGCGGTGGC GGTGATCTGG
GGCTGGCTAC CGGCCTTCCT GTGGGTCACG CTCGGCACCA TCTTCTTCGC CGGCATGCAC
GACCTGGGTG CACTGTGGGC CTCGGTGCGC AACCGGGGGC AGTCCATCGG CTCGCTGTCG
GCCCGGTACA TCGGGCGTCG CGGGGCCAAC CTGTTCCTGG TCGTCATCTT CCTGCTGCTG
CTGATGGTGA ACGCGGCCTT CGCGGTGGTC ATCTCCGGCC TGCTGGTCAG CACCCCGAGC
GCGGTTATCC CCACCTGGGG CGCGATCGCC GTGGCCCTGC TGATCGGCCA GGCCATCTAC
CGCTTCCGCT GGAACCTGCC GATCGTCAGC GTGGTGGGCG TCGTCGCCCT GTACGCCCTG
ATCTGGCTGG GTGACCAGTA CCCGGTCTCG CTGCCGGACA CGGTCCTGGG CATGCCGGCC
AGCGGCGTGT GGATCGTCAT CTTGTTCGCC TACGCGGGCA TCGCCTCGGT GCTGCCGGTG
TGGCTCCTGC TGCAGCCGCG CGACTACATC AACGGCCTGC AACTCTTCCT GGCGCTGGGC
ATCCTGTTCG CCGCGGTGCT CATCTCCACC CCCACCGTGG TGGCCCCGGC CATCAACGAC
GCGGTGCCGG AGGGCACGCC GGGCATCGCG CCGCTGCTGT TCGTCACCAT CGCCTGCGGC
GCCATCTCCG GCTTCCACGG CATGGTCGCC TCGGGCACCA GCTCCAAGCA GCTCGACAAC
GAGACCGACG CCCGCTTCGT CGGGTACTTC GGCGCCGTGG GCGAGGGGCT GCTGGCCCTG
GGTGCGATCG TCGCCACCAC CGCCGGCTTC CAGACCCTCG CGGACTGGGA GGAGGTCTAC
AGCGCGTTCG GGCAGGGCGG TGTCGCCGCG TTCGTCGAGG GCGGTGGTTC CATCGTCCAG
AACGGCCTGG GCCTGCCGCA GTCGCTGAGT GCCACCATCC TGGCCACCAC GGCCGTGCTC
TTCGCCGCGA CCACCATGGA CACCGGTGTG CGTCTGCAGC GCTTCGTGGT CTCGGAGATC
GGCGAGGTCA TGGGCGTGAC GCTCAACAAG TGGGTCTCCA CCGCCATCGT GCTGGTGGTG
GCCGTGGGCC TGACCTTCGC CGCCGGTGCG GACGGCTCCG GTGGCATGCT CATCTGGCCG
CTGTTCGGCA CCACCAACCA GATCATGGCC GGGCTGACCC TCGCCATCGT CGCGGTGATG
CTGCTGCGCC GTGGGCGCCC CGCGCTGCCG GCGATCATCC CGCTGACCTT CGTGCTGATC
ATGAGCGTGC TGGCCCTGCT GGTGCAGATG GGCACCTTCT GGCAGGACCG CAACTGGCTG
CTGCTGGTGC TGGACGTGAT CATCCTGGTG GCCGCCGTGT GGGTCATCGT CGAGGCCGTG
GGCGCGATGG TGCGTGCCTC CCGCGGAGAG GTCGACGACG ACGAGCACGA CCCCCTCGAC
GCGGATGAGG GGGCGACGGC CCGAGATGCC GTCTCCCGCT GA
 
Protein sequence
MNSLVLVLVG IAMILAGYLL YSRWLATRVY TLDAGFRTPS HALRDDVDFV PTNKYVLWGH 
HFTSVAGAAP IVGPAVAVIW GWLPAFLWVT LGTIFFAGMH DLGALWASVR NRGQSIGSLS
ARYIGRRGAN LFLVVIFLLL LMVNAAFAVV ISGLLVSTPS AVIPTWGAIA VALLIGQAIY
RFRWNLPIVS VVGVVALYAL IWLGDQYPVS LPDTVLGMPA SGVWIVILFA YAGIASVLPV
WLLLQPRDYI NGLQLFLALG ILFAAVLIST PTVVAPAIND AVPEGTPGIA PLLFVTIACG
AISGFHGMVA SGTSSKQLDN ETDARFVGYF GAVGEGLLAL GAIVATTAGF QTLADWEEVY
SAFGQGGVAA FVEGGGSIVQ NGLGLPQSLS ATILATTAVL FAATTMDTGV RLQRFVVSEI
GEVMGVTLNK WVSTAIVLVV AVGLTFAAGA DGSGGMLIWP LFGTTNQIMA GLTLAIVAVM
LLRRGRPALP AIIPLTFVLI MSVLALLVQM GTFWQDRNWL LLVLDVIILV AAVWVIVEAV
GAMVRASRGE VDDDEHDPLD ADEGATARDA VSR