Gene Ksed_03060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_03060 
Symbol 
ID8371816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp294400 
End bp295515 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content71% 
IMG OID644990602 
ProductL-alanine dehydrogenase 
Protein accessionYP_003148148 
Protein GI256824188 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GAGTCCCCAC TGAGGTCAAG AACAACGAGT ACCGGGTCGG CATGACCCCC 
GTCGGCGTCC GGGAGCTCAC CGGCCGCGGC CACGAGGTGC TCGTGCAAGC CGGAGCCGGC
GTGGGCTCCT CGATCACCGA CGAGGAGTAC GCCGCCCAGG GCGCCCGCAT CGTGGAGTCC
GCGGACGAGG TCTGGGGCGA GGCCGAGATG GTCGTCAAGG TCAAGGAGCC GATCGCCGAG
GAGTACGGCC GCCTGCGCGC CGACCAGGTG CTGTTCACCT ATCTGCACCT GGCCGCCGAG
CCGGAGCTGA CGAAGGCACT GATCGATGCG GGGACGACCT CCATCGCGTA CGAGACGGTG
CAGCGCCCCG ACCGCTCCCT GCCGCTGCTG TACCCCATGA GCGAGGTCGC CGGCTGTCTC
GCCCCCCAAG TGGGCGCGGC CTCCCTGCTC AAGGCCCGCG GTGGCCGTGG GGTGCTGATG
GGCGGCGTCG GTGGCGTTGC GGGCGCAAAG GTGGCTGTGC TGGGCGCCGG GACCGCCGGC
CAGAACGCCG CGAACATCGC GATGGGGATG GGCGCCGACG TCACGCTGCT CGACATCGAC
CTGGAGAAGC TCCGTATGAG CTTCTGGCGC TACGGCAACC GGGTGCACGG CATCGCGTCC
TCGGAGCTGG CGATCGAGCG CGCGGTCACC GAGGCCGACC TGGTGATCGG CTCGGTGCTG
ATCCCCGGCG CCGCGGCCCC CAAGCTGGTG ACGAACGACC TCGTGGCTCA GATGAAGCCG
GGCAGCGTGC TGGTGGACAT CGCCATCGAC CAGGGCGGCT GCTTCGAGGA CTCCCACCCC
ACCACGCACG ACGACCCCAC CTTCGAGGTG CACGACTCGA TCTTCTACTG CGTGGCGAAC
ATGCCCGGCG CCGTGCCAGC CACCTCCACG CAGGCCCTGA CCAACGCGAC CCTGCCGTAC
ACGCTGCGGA TCGCTGATGC GGGGTGGAAG GCCGCGCTGG GCGCTGATGA GGCACTCGCC
AAGGGCCTGG CCACGCACGC CGGATCGCTG TACTCGGCGC CCGTCGGTGA GGCGCTCGGC
ATCGAGAGCA AGGACCCGGC CGGCCTGCTC GGCTGA
 
Protein sequence
MRIGVPTEVK NNEYRVGMTP VGVRELTGRG HEVLVQAGAG VGSSITDEEY AAQGARIVES 
ADEVWGEAEM VVKVKEPIAE EYGRLRADQV LFTYLHLAAE PELTKALIDA GTTSIAYETV
QRPDRSLPLL YPMSEVAGCL APQVGAASLL KARGGRGVLM GGVGGVAGAK VAVLGAGTAG
QNAANIAMGM GADVTLLDID LEKLRMSFWR YGNRVHGIAS SELAIERAVT EADLVIGSVL
IPGAAAPKLV TNDLVAQMKP GSVLVDIAID QGGCFEDSHP TTHDDPTFEV HDSIFYCVAN
MPGAVPATST QALTNATLPY TLRIADAGWK AALGADEALA KGLATHAGSL YSAPVGEALG
IESKDPAGLL G