Gene Ksed_02820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_02820 
Symbol 
ID8371794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp273585 
End bp276047 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content70% 
IMG OID644990581 
Productputative phosphoketolase 
Protein accessionYP_003148127 
Protein GI256824167 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3957] Phosphoketolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG TCCCCGCCTG GCCCGATGAC CCCGCCACGC CCCTGGACGA CGAGGAGGCC 
CGCCGCCTGC ACGCGTGGTG GCGCGCGGCG AACTACCTCT CCGTGGGGCA GATCTACCTG
CTGGACAACC CGCTGCTGCG GGAGGAGCTC GCGCCCGAGC ACGTGAAGCC CCGCCTGCTG
GGCCACTGGG GCACCACCCC GGGCCTGACC TTCCTCTACG CGCACTTCAA CCGCGCCATC
CGCCAGCGGG GCCTGAACGC GTGCTACGTC ACCGGGCCCG GCCACGGCGG ACCGGGTCTG
GTGGCCGCCA CCTACCTCGA GGGCACCTGG ACCGAGACCT ACCCCGACGT GGGGCAGGAC
CTCGACGGGC TGCAGCGCCT GTGCAAGCAG TTCTCCTTCC CCGGCGGCAT CCCCTCCCAC
GTGGCGCCGG AGGTCCCGGG GTCGATCCAC GAGGGCGGGG AGCTGGGGTA TTCGCTCTCG
CACGCCTACG GGGCGATGCT GGACAACCCC GACCAGATCG CCTTCACGGT CGTCGGTGAC
GGGGAGGCCG AGACCGGGCC GCTGGCGACC TCCTGGCACG CGAACAAGTT CTCGGACCCG
CAGCACGACG GGGTGGTCCT GCCGGTGCTG CACCTCAACG GGTACAAGAT CGCCAACCCG
ACGGTGCTGG CCCGCATCCC CGAGGAGGAG CTCGTCTCCC TGATGCGGGG CTACGGCCAC
ACGCCGCTGC TGTTCACCGC CGGGTTCGAC GACGAGGACG AGCTCTCCGT CCACCGCCGG
TTCGCCGCCG TGCTGGACGA GGCGCTCGAC CTCATCGCGC AGATCAAGGC CGATGCGGGG
CCGGACTCGC CGCGCCCAGC CTGGCCGATG ATCGTGTTCC GCACCCCCAA GGGGTGGACC
GGCCCCGAGC AGGTGGATGG CAAGCAGACC GAGGGTCACT GGCGCTCGCA CCAGGTGCCG
CTGGCCAACG CCCGTGACAC CCCCGAGCAC CTGGAGGTCC TCGCGAACTG GCTGCGCTCG
TACCGGCCGG AGGAGCTCTT CGCCCAGGAC GGCGCCCTGT TGCCCGAGAT CGCCGCGATG
GCGCCGCAGG GCGAGAAGCG CATGTCGGCC AACCCCATCA CCAACGGCGG CAGCGTGCTG
CGCGACCTGA TGCTGCCGGA CTTCCGCGAC CACGCCGTCG AGCTGACCTC ACCCGGCCAG
CCCTTCTCGG AGGCGACGAG CGTGCTGGGG GGCTACCTGC GGGAGGTGAT GCGCAGGAAC
CCCGAGACCT TCCGCCTGTT CGGGCCGGAC GAGACGGCGT CGAACCGCCT GCAGGCCGTG
TACGAGGTCA CCGACAAGCA GTGGAACGCC GAGTACCACC CGAGCGACGC CGAGGACCCG
ATGGCGCGCG CCGGGCGGGT GCTGGAGATG CTCTCGGAGC ACCAGTGCCA GGGGTGGCTG
GAGGGTTACC TGCTCACCGG GCGCCACGGG ATGCTGAACT CCTACGAGGC CTTCGTCCAC
ATCGTCGACT CGATGGTGAA CCAGCACGCC AAGTGGTACA AGGTCACCAA CCAGCTCGAG
TGGCGGCGCC CGCTGGCCTC GTTGAACTAC CTGCTCTCCT CGCACGTGTG GCGGCAGGAC
CACAACGGCT TCTCCCACCA GGACCCCGGG TTCATCGACC ACGTGGTCAA CAAGAAGGCG
GAGATCGTGC GGGTGTACCT GCCGCCGGAC GCGAACACCC TGCTCTCGAC GGTGGACCAC
TGCCTGCGCT CCCGGCAGTA CGTCAACGTG GTGGTGGCCG GCAAGCAGCC GAACCCCACG
TGGTTGACGA TGGAGGAGGC GATCGCCCAC TGCGTGCGCG GCATCGGCAT TTGGCCGTGG
GCCGGGACGG AGTCCGACGG TGACGACCCC GACGTGGTGC TGGGCTGCGC GGGCGACATC
CCCACCATCG AGGTCCTGGC GGCCGCGAAG ATCCTGCGCG AGGAGGTGCC GGGGCTGACC
TTCCGGGTCG TGAACGTGGT GGACCTGATG CGCCTGCAGG ACGAGAAGGC CCACCCGCAC
GGGCTGTCCG AGACGCAGTT CCACACCCTT TTCCCCGCCG GCACACCCGT GGTCTTCGGG
TACCACGGCT ACCCGTGGCT GATCCACCGC CTGGTCTACC GGCACGACAC CGCATCACAC
TTCCACGTGC GCGGGTACAC CGAGGAGGGC ACCACCACCA CGCCCTTCGA CATGGTGATG
CGCAACCAGC TGGACCGCTA CCAGCTGGTG GTCGACGTCA TCGACCGCGT GCCGGCCCTG
GGTTCGCGCT ACGCCCGGCT CCGCCAGCGC ATGGAGGACA AGCGACTGCA GGCCCGTGCC
CACGCCTACG AGCACGGGGA GGACCTGCCC GAGGTCGCCC AGTGGCAGTG GGGTGACGCC
CAGGACGAGG CCGATGCCCA GCAGGGCAGC GTGCGTCAGG ACACCGGCGG CGACAACGTC
TGA
 
Protein sequence
MITVPAWPDD PATPLDDEEA RRLHAWWRAA NYLSVGQIYL LDNPLLREEL APEHVKPRLL 
GHWGTTPGLT FLYAHFNRAI RQRGLNACYV TGPGHGGPGL VAATYLEGTW TETYPDVGQD
LDGLQRLCKQ FSFPGGIPSH VAPEVPGSIH EGGELGYSLS HAYGAMLDNP DQIAFTVVGD
GEAETGPLAT SWHANKFSDP QHDGVVLPVL HLNGYKIANP TVLARIPEEE LVSLMRGYGH
TPLLFTAGFD DEDELSVHRR FAAVLDEALD LIAQIKADAG PDSPRPAWPM IVFRTPKGWT
GPEQVDGKQT EGHWRSHQVP LANARDTPEH LEVLANWLRS YRPEELFAQD GALLPEIAAM
APQGEKRMSA NPITNGGSVL RDLMLPDFRD HAVELTSPGQ PFSEATSVLG GYLREVMRRN
PETFRLFGPD ETASNRLQAV YEVTDKQWNA EYHPSDAEDP MARAGRVLEM LSEHQCQGWL
EGYLLTGRHG MLNSYEAFVH IVDSMVNQHA KWYKVTNQLE WRRPLASLNY LLSSHVWRQD
HNGFSHQDPG FIDHVVNKKA EIVRVYLPPD ANTLLSTVDH CLRSRQYVNV VVAGKQPNPT
WLTMEEAIAH CVRGIGIWPW AGTESDGDDP DVVLGCAGDI PTIEVLAAAK ILREEVPGLT
FRVVNVVDLM RLQDEKAHPH GLSETQFHTL FPAGTPVVFG YHGYPWLIHR LVYRHDTASH
FHVRGYTEEG TTTTPFDMVM RNQLDRYQLV VDVIDRVPAL GSRYARLRQR MEDKRLQARA
HAYEHGEDLP EVAQWQWGDA QDEADAQQGS VRQDTGGDNV