Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_02220 |
Symbol | |
ID | 8371734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 220380 |
End bp | 221135 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644990526 |
Product | MIP family channel protein |
Protein accession | YP_003148072 |
Protein GI | 256824112 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 0.967608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAAGC GCCTGGCCGC CGAGGCCCTG GGCACCTTCT GGCTGGTCTT CGGCGGCTGC GGCTCGGCGA TCTTCGCCGC CGCCAGCATG GGGGAGGCTG CTGGCGAGCC CATCCACGTC GGCATCGGCT ACCTGGGCGT CGCCCTGGCC TTCGGGCTCA CCGTGGTCAC CATGGCCTAC GCCGTCGGTC ATGTCTCCGG CGGGCACTTC AACCCGGCCG TGACGGTCGG CCTGGCCACC GCTGGCCGCC ACCCGTGGAA GGACGTGCTG CCCTACGTCG TCGTCCAGGT CATCGCCGGT CTGGTGGCTG GTGGTGCGCT CTACGCCATC GCCACCGGCA AGGCCGGCTT CGAGGCGGTC GGCAGCATGG CGGCCAACGG CTACGGCGCG AACTCGCCCG AGGGCTACTC GATGATGGCC GTCCTGCTGG CGGAGGTGAT CCTCACGGCG TTCTTCCTGT ACGTGATCCT CGGCGCCACC GACGACCGCG CCCCCCAGGG CTTCGGCCCC CTGGCCATCG GCCTGGCGCT CACGCTGATC CACCTGATCT CCATCCCGGT GTCGAACACC TCGGTGAACC CCGCCCGGTC CACCGGCGTG GCCTTCTTCC ACGGCGACGG TGCCCCGGCC CAGCTTTGGC TCTTCTGGCT GGCGCCCGTC CTCGGCGCGG TCATCGCCGG CATCAGCTAC CACGCACTGC TGGGCGAGGA GAAGCGTTCG GCCATCCGCG AGGCCGCCGC TCACGACGCC GCCTGA
|
Protein sequence | MPKRLAAEAL GTFWLVFGGC GSAIFAAASM GEAAGEPIHV GIGYLGVALA FGLTVVTMAY AVGHVSGGHF NPAVTVGLAT AGRHPWKDVL PYVVVQVIAG LVAGGALYAI ATGKAGFEAV GSMAANGYGA NSPEGYSMMA VLLAEVILTA FFLYVILGAT DDRAPQGFGP LAIGLALTLI HLISIPVSNT SVNPARSTGV AFFHGDGAPA QLWLFWLAPV LGAVIAGISY HALLGEEKRS AIREAAAHDA A
|
| |